Detail



ID : Ahg485357

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485357|fgenesh2_kg.5__1349__AT3G49990.1
Sequence
ATGGGGAAGA AGAAGTTTAT TGATAAGAAA AAGGCGGCGA CTTTCGAGTT GTGTCCTCGT GATACGTCTG ACCCAAGATA CAGTGATGCA CCAGGTGGTG ATAAGATCTT CTTACGAGTT GATCAAAACC CTGTTAACAT CAATGGTTTC ATCGAAGAAG AAGATGAAGA AGAAGAAGAA GGAGACAGTT CACGGTTTGA AGATGCTCCT GAAGAGTTGG ATTATGATTA CTCTAATTTC GGGGAGTCGA GTATTAATCC TTTACCTGCT CATGTGAGGA AGGAGATTTT GGAGTTAGGG TATCCTGATG ATGGTTATAA TTACTTGGAG CATTTGAGAG AGATTAAGAA TACTGGTGGT GGTTCTAATT TCTATGCGAA TCCTAAGTTT GTTGTTGATC AGTTACCTCG TGATGTTAAG GCTTATGATG CGTCTCGTGT TAAGATCTCT GGTATGGTGA ATGAAGAAGG TAATGATAAT AAGTTGATGT ATAGTGTGGC GTCGAAGACT GTTAACGTCA AGGTGCAGAA AGCTATTGAT CCTGAAGTTG CTGCGTTGCT TGAAAACAGT GATGGGTCTG AGTTTGGTTC TGATGTTGAG GATTTGGAAG AAGATTTTGT TATTCAAGCT AATCTTACTC AACAGGGTGA AACTTCTGGT GTGAGCAATG TTGAGTTTTC TGAAATTCCT GAGGTAAGGA ATAGAGAAAG TGATAAACCT GTGGCTGAAA ACCCGAGAGT TCCTCGTCAA ATTGATGAGC TATTTGATCA GCTCGAACTC AATGAATATG GAAGTGACAG TGACTGTGAT GGTTACATAG CTGAAGATGG AGAAGAAGAA GACTTCATGG CTCAAGACGT TCAGAATCTT ATTCATGAGA AGGCGAAAGA TTATGAGCTT GAAGAAAAAT ATATGAACCT TGCAGATATA TTGAAGAACA GTGACTCTGT TAAAGATAAA GAGGAAGTGG ACACTGCTGC TCATATTATC CGCCGAACTG TAGAATATGG TGAAAATTTT GATAACGGAA ATGAAGATGA ATTTGTAGAG CTGACTGAAG AAAGCAGTGA CGAAAGCGAG AAGTATGATT GTGATACTAT AGTCTCAACA TACTCGAATC GGGATAACCT CCCTGGTAAA ATCCTTGCTG CCGAGTCAGT CAGGCAGAAG AAGCTGAGTG AAACAGTAGC TAAAGCATTG AGTTCAAACG GCAGAATCAT TACTCTCCAA GGGAGAGAGA AGATTCCTGT CGAGTTTTTA CCTGGTAGGA GAGCGGAACA AACCGATGTC AAATCGGAAA TCCCAAAAGC TGAACCGATC AAGAGGAAGA CTCATGGTCA AGAGTCGAAA GAAGAGAAGA AAGAGCGGAA AAATGCTGTA AAAACCGAAA AGCGAGAAGC AAGGATAATG AAGAAACAGA CATCCGAGCT GTATCGTTAT GAAACGCTCC GTGCTCAGAA AGCTGTTGCT TCCTCTGGTC CAAAGTCGAA ACATCTATAA TAATACTGTT ACGAAGGTAA AACAAAACAA TTCTCAGACT GTTTAAACCA GTTTTTGAAG TCACTTGGTG TAATATTTGC TGTGTTTTTT TTTCGTTTCA TCAAGATTTG AAAATCTTGA ATCTTTTTTT TGGATGTGGA CGTTTTGAAT ATTATTTATT ACTTTTACTA GTC 
Length1673
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14059877.. 14061553
Download Sequence
A.thaliana
AGI-codeAT3G49990.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg487833 RNase L inhibitor protein-related
11.1803 Ahg472407 ATPase family associated with various cellular activities (AAA)
11.4018 Ahg938163 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein
14.2829 Ahg940592 DEAD/DEAH box RNA helicase family protein
16.2481 Ahg487428 RNA binding (RRM/RBD/RNP motifs) family protein
22.6495 Ahg950851 DEA(D/H)-box RNA helicase family protein
22.7156 Ahg900570 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein
23.2379 Ahg488708 Ribosomal protein S5 domain 2-like superfamily protein
24.98 Ahg471469 ARM repeat superfamily protein
28.5482 Ahg935276 Sas10/U3 ribonucleoprotein (Utp) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression