| Annotation |
|---|
| Description | jgi|Araly1|485612|fgenesh2_kg.5__1604__AT3G52450.1 |
| Sequence |
GCTAACTTAT TCAAACCAAT TCACATAGCT CCTAAATCTC AACGAATACA CTTTGAGGCA ACATTTTCTT TTGTTGAGAT TCGTTCGTCG TTTCTATTCA TTAAGTCTTA CTTCTTCTTT TTTCATATTT TCGGGCGGGT CAAATGGATC AAGAGATAGA GATTCCTTCC TTCTTCCTTT GTCCGATCTC TCTAGATATC ATGAAAGATC CGGTGATTGT TTCCACCGGA ATAACCTACG ACAGAGAAAG CATCGAGAAA TGGCTCTTTT CCGGTAAGAA AAACTCATGT CCGGTCACCA AACAAGTCAT AACCGAAACC GATCTTACCC CAAACCACAC TCTTCGCCGC CTGATCCAAT CTTGGTGTAC TCTTAACGCA TCATACGGTA TCGAGAGGAT CCCAACCCCA AAACCTCCGA TCTGTAAATC CGAGATCGAA AAGCTTATCA AAGATTCGTC AACTTCGCAT CTAAACCAAG TCAAATGCCT CAAACGACTT CGTCAAATAG TATCGGAGAA TACGACGAAC AAACGTTGCT TAGAAGCCGC AGAAGTTCCG GAGTTTTTGG CGAATATCGT AAGCAACTCC GTTGATACGT ATAGTTCTCC TTCTTCTTCG CTTTCTTCTT CGAATTACAA CGACATGTGT CAGTCAAACA TGTTGGAGAA TCGATTTGAT TCTTCAAGAA GCTTGATGGA CGAAGCCCTA AGCGTACTCT ACCATCTTGA CACATCGGAG ACAGCCCTCA AGAGTCTTTT AAACAACAAG AAAGGAACAA ATCTTGTCAA AACGTTGACG AAGATTATGC AACGTGGGAT CTACGAGTCG AGAGCCTATG CGGCTTTGCT TCTCAAGAAG CTCCTAGAAG TTGCGGATCC AATGCAGATC ATATTGTTGG AACGAGAACT TTTCGGTGAG GTGGTTCAGA TCTTGCATGA CCAGATCTCT CACAAGGCGA CAAGATCAGC AATGCAAATC TTGGTGATTA CATGTCCATG GGGAAGGAAT AGACACAAGG CAGTGGAAGC TGGAGCAATT TCGATGATAA TCGAGCTTTT AATGGACGAT ACTTTCTCAT CTGAGCGAAG AAATTCGGAG ATGGCGATGG TTGTTCTTGA TATGTTATGT CAGTGCGCAG AAGGAAGAGC TGAGTTCTTG AATCATGGTG CGGCTATTGC GGTTGTGTCT AAGAAGATAT TGAGGGTCTC ACAGATAACT AGTGAAAGGG CGGTTAGGGT TTTGCTTTTG GTTGGGAGGT TCTGTGCGAC ACCCTCTTTG TTGCAGGAGA TGTTGCAATT GGGAGTTGTA GCAAAGCTGT GTCTGGTTCT TCAAGTTAGC TGTGGGAACA AAACTAAAGA AAAGGCGAAG GAATTGCTTA AGCTTCACGC CAGGGTTTGG AGGGAATCAC CTTGTGTCCC AAGAAATTTG TATGATTCGT ATCCTGCTTG AACAACGTAC ATGTTTGATT AATTCTCATC AGTGACAAAA ATTCTTTGAG AGTTATTCTT CTCTTCGTAT AAGTTCATTT AAAAACAAAA AAGAGTGGTT TAATTTTTGC TCAAACTCAG ATTTTCTTTT GTTTTTGTTA TATATGTGTA GATAATAGTG GATATATTTT CATGAAATTA TG |
| Length | 1632 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15207213.. 15208876 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G52450.1 |
| Description | plant U-box 22 |
| TAIR curator summary | Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. |
| Alias | [AtPUB22][PUB22][plant U-box 22] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg482563 | plant U-box 23 |
| 4.89898 |
Ahg925763 | CYS, MET, PRO, and GLY protein 1 |
| 7.93725 |
Ahg471409 | Integrase-type DNA-binding superfamily protein |
| 10.6771 |
Ahg915575 | cytochrome P450, family 707, subfamily A, polypeptide 3 |
| 10.7238 |
Ahg477526 | ARM repeat superfamily protein |
| 10.7703 |
Ahg327275 | 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 |
| 12.3288 |
Ahg946362 | F-box family protein |
| 16.5831 |
Ahg929526 | COBRA-like protein 8 precursor |
| 17.1464 |
Ahg481588 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| 17.7482 |
Ahg945643 | dicarboxylate carrier 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|