Detail



ID : Ahg929526

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929526|scaffold_301983.1
Sequence
CTCAAGAGAT TTAGAGTAAT CATGGGTTTA ACTCCAAATT TCATTTCATG GATTCTTTTG TTATCTATCT TCACGGCGAT TCAACTAACA TCGTGTCAGC CCAACGCTCC TCCACCACGC TCTCCAGACT CTGATCTCTG CAACGGCGTG TTTGTTTCCT ACACTTACTC AACCGGTACC AAGATTAAAC CGAACGACAC GAAGAACCAG CCGTACCGGT TCGAATCAGA GATCACGGTG CTCAACAACG GCCGCGACGA GCTTAAATCG TGGCGTGTCT TCGTTGGATT CGCCCACCGT GAGATTCTTG TTTCAGCCAC CAACGCTGTT CTCTCCGATG GTTCTAGCCT CCCGGTTAGC GTCGAGAACG GGACAATCTT CGCCGGGTTT CCATCGGCTG ATTTGAAGTC GGCGATTATG ACGGCGGGTG ACGTCACTCA GATGCAAGCA CGTGTTAAGC TCGTGGGTAC TCAGTTTGGA GTTGCGCCGC CGAATGTTCC GCTTCCGAAG AACATCACTC TTGTTAATGA TGGATGGTCT TGTCCTAAAC CCACTCAGCA AGGTAGGAAT GTTCTGCAAG TATGTTGCAC GCCGAATCCG AACATAACAA CAGGCAAAAT TGGTGAAATG TTCCTTCCTA GGCAAGAGGG AGATCTAACC ATAATGTACG ATGTGACCAA AGCATATCAG TCGAATTACT TGGCGCAGGT CACTATCGAG AATCATAACT TGCTTGGTCG GCTTGACAAT TGGAATCTAA GTTTTTTGTG GATGAAAGAT GAGTTTATCT TCACAACCAA AGGAGCTTAT CCGAGTGTTG TCGATTCATC AGATTGCATC AATGGTCCTC AAGCAAAATA CTATAAAGAT CTTGACTTCT CTCATGTCTT GAGCTGTGCA AGAAGGCCAC ACATCATAGA CCTCCCTCTT ACTAAGTATA ACGATACCGA TTTCGGGCGT ATCCCATATT GCTGCAGAAA CGGAACGATT CTGCCACGGT CCATGGATCC AGAGAAGTCA AAATCAGTCT TTCAAATACA AGTTTACAAA ATGCCTCCAG ATCTCAACAT GTCTGCCATA ACACCTCCCC AGAGCTGGCA GATTAAAGGG AACCTTAACC CGGATTACAA ATGTGGTCCT CCTGTTCGAG TCAGCTCGAG CCAGTTCCCT GATCCAAGCG GTTTACCCTC AAACCGGAGT GCATTTGCTA GCTGGCAAGT CGTCTGCAAC ATCACTCAAC CAGTTACTCC TAAATGCTGT GTCTCATTCT CTTCTTACTT CAATGATTCA ATAATCCCCT GTAAGACCTG CGCTTGTGGA GGTTGCACTA GCGACAGAGT TGCGCGTACT TGCAGCACAA CTTCTCCAGC TCTTCTTCTT CCATCTCAGG CTCTTCTTAT TCCGTTTGAG AACCGAACCA AACTTACTAC CGCTTGGGCA GAGTTAAAAC ACCGGAAAGT CCCGGACCCA TTGCCTTGTG GAGATAACTG TGGAGTCAGT ATAAACTGGC ATCTAGCCAC GGACTATCGA GGCGGATGGA CTGCTCGGAT CACACTCTTC AATTGGGGTG AAACTGACTT CGTGGATTGG TTTACCGCGG TTGAACTGAG AAATGCTGCA TCCGGTTTTG AGAAAGCGTA CTCGTTTAAC GGAACTACCA TCGCTATCAA CGGAAAGAAC ACCACTGTTT TAATGGAAGG GCTCCCTGGA CTGAACTATC TCCTTGCAGA GAGAGACGGA AAAACCCCGA GTAAGGACTT TCGGTTACCC GGGAAACAGC AGTCAGTTAT CTCCTTCACC AAGAAACTAA CTCCTGGACT CAAAGTTGGT TCCAGAGATG GGTTTCCGAC CAAAGTATTA TTCAACGGCC AAGAATGTTC ACTCCCTTCT GTACTACCAA CGAACAACGG TCACAAGAAA CATGTATCGA CTTTTCTTCT CATGGCGACT CCATTTTTGG CTCTACTGTT TCTGCGGATT TAAGAGTTCC GGTGAGGAGC TTC 
Length2003
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6792403.. 6794869
Download Sequence
A.thaliana
AGI-codeAT3G16860.1
DescriptionCOBRA-like protein 8 precursor
TAIR curator summary
Alias[COBL8][COBRA-like protein 8 precursor]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg944463 redox responsive transcription factor 1
5.74456 Ahg949754 Integrase-type DNA-binding superfamily protein
6.16441 Ahg939220 arabinogalactan protein 20
6.48074 Ahg899984
6.48074 Ahg476823 calmodulin-like 38
12.8062 Ahg949051 calmodulin like 37
13.6382 Ahg471409 Integrase-type DNA-binding superfamily protein
14 Ahg912827 jasmonate-zim-domain protein 8
14.1421 Ahg312706 jasmonate-zim-domain protein 5
14.3178 Ahg312784 nudix hydrolase homolog 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression