| Annotation |
|---|
| Description | jgi|Araly1|939714|scaffold_600258.1 |
| Sequence |
GTTCAATCTC AGCTATCACT ATGTCAAACC AACCTGAATC TTCCGACTCG AAACCTAAGA AGGATTTCAG TACTGCGATT CTCGAGAGGA AGAAGTCTCC AAACCGACTT GTTGTCGATG AAGCCATTAA CGATGACAAC TCTGTTGTCT CTCTCCATCC TGCTACCATG GAAAAGCTCC AGCTTTTCCG AGGCGATACA ATTCTCATCA AGGGTAAGAA GAGAAAGGAC ACTGTGTGCA TTGCCCTTGC TGATGAAACA TGTGAGGAAC CCAGGATCAG AATGAATAAG GTTGTAAGGT CTAACTTGAG GGTTAGGCTG GGAGATGTTA TTTCTGTTCA CCAATGCCCA GATGTCAAGT ATGGAAAGCG TGTGCACATC TTGCCAGTTG ATGATACAGT TGAAGGCGTT ACTGGAAACC TTTTTGATGC TTACCTTAAA CCTTACTTCC TGGAGGCGTA CCGCCCAGTG AGGAAGGGAG ATCTTTTCCT AGTGAGAGGA GGAATGAGGA GTGTGGAGTT CAAAGTGATC GAGACTGATC CTGCTGAGTA CTGTGTGGTG GCTCCAGATA CAGAGATTTT CTGTGAGGGT GAACCAGTCA AGAGGGAAGA CGAAGAAAGG CTTGATGAGG TCGGTTATGA CGATGTTGGT GGTGTCAGGA AACAGATGGC TCAGATTAGG GAATTGGTTG AACTTCCCTT GAGGCATCCA CAACTCTTTA AATCAATTGG TGTGAAGCCA CCAAAGGGAA TTCTGCTTTA TGGACCTCCT GGATCCGGGA AGACTCTTAT TGCTCGTGCT GTGGCTAATG AAACCGGGGC ATTTTTCTTC TGTATCAATG GACCGGAAAT CATGTCCAAA CTGGCTGGTG AGAGTGAGAG CAACCTCAGG AAAGCATTTG AGGAGGCTGA GAAGAATGCC CCTTCTATCA TATTCATTGA TGAGATTGAC TCTATTGCAC CAAAAAGAGA GAAGACGAAT GGTGAGGTTG AGAGGAGGAT TGTCTCTCAG CTCCTTACGC TTATGGATGG ACTAAAATCA CGTGCCCATG TTATTGTTAT GGGAGCAACA AATCGCCCCA ACAGTATTGA TCCGGCTTTG AGAAGGTTTG GAAGATTCGA CAGGGAAATT GATATCGGTG TTCCTGATGA AATTGGACGT CTTGAAGTTC TTAGGATCCA CACAAAGAAC ATGAAGCTAG CTGAAGATGT GGATCTAGAA AGAATCTCCA AGGACACGCA TGGATATGTT GGAGCTGATC TTGCAGCTCT ATGCACTGAA GCTGCCCTTC AATGTATCAG AGAGAAGATG GATGTGATTG ACTTGGAAGA TGACTCAATT GACGCCGAAA TCCTCAATTC CATGGCGGTG TCTAATGAAC ACTTCCACAC CGCTCTTGGA AACAGCAACC CATCCGCACT TCGTGAAACT GTTGTGGAGG TTCCAAATGT CTCCTGGGAG GATATTGGAG GTCTTGAGAA TGTTAAGAGA GAGCTTCAGG AGACTGTTCA ATACCCTGTT GAGCATCCAG AGAAATTCGA AAAGTTTGGT ATGTCTCCAT CAAAGGGAGT TCTTTTCTAC GGTCCTCCTG GATGTGGGAA AACCCTTTTA GCCAAAGCTA TAGCAAACGA GTGCCAAGCA AACTTCATCA GTGTCAAAGG ACCTGAGCTT CTCACAATGT GGTTTGGAGA AAGTGAAGCC AACGTCCGTG AAATCTTTGA CAAGGCTCGT CAATCTGCTC CTTGTGTTCT GTTTTTCGAT GAGCTCGACT CCATTGCTAC TCAGAGAGGA AACAGCGTGG GTGATGCCGG CGGTGCAGCT GATAGAGTGT TGAATCAGCT TCTGACAGAA ATGGATGGAA TGAATGCAAA GAAGACGGTA TTCATTATTG GAGCAACTAA CAGGCCGGAT ATCATAGATC CAGCTCTTCT TCGACCTGGA AGACTCGACC AGCTTATCTA TATTCCTCTA CCTGATGAAG ATTCCCGTCT CAATATCTTC AAGGCCTGCT TGAGAAAATC TCCTGTCGCT AAAGATGTAG ATGTGACTGC ACTCGCTAAG TACACTCAGG GATTCAGTGG TGCTGATATC ACTGAGATCT GCCAGAGAGC TTGCAAGTAC GCCATCAGAG AAAATATCGA AAAGGATATT GAGAAAGAGC GTAGAAGGAG CGAGAATCCA GAGGCGATGG AGGAAGATAT GGTGGATGAT GAAGTTTCAG AGATTCGAGC TGCTCATTTC GAAGAGTCGA TGAAATATGC AAGGAGAAGT GTAAGTGATG CTGATATTCG CAAGTACCAA GCTTTTGCTC AGACACTGCA GCAATCGAGA GGGTTTGGAT CTGAGTTCAG GTTTGACTCA ACCGCTTCTG CGGGACGCAC CATTGGTGGT GCACCCGCTG ATCCCTTTGC CACTTCTGCA GCTGCAGCTG ATGACGACGA TCTCTACAGT TAGATTATGA TTTCTCTCGT TTT |
| Length | 2473 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 911955.. 915000 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G03340.1 |
| Description | ATPase, AAA-type, CDC48 protein |
| TAIR curator summary | |
| Alias | [AtCDC48C][cell division cycle 48C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg481396 | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related |
| 5.47723 |
Ahg470259 | AAA-type ATPase family protein |
| 7.14143 |
Ahg481469 | FTSH protease 4 |
| 8 |
Ahg470988 | soybean gene regulated by cold-2 |
| 8.06226 |
Ahg492255 | conserved peptide upstream open reading frame 13 |
| 8.94427 |
Ahg480637 | Endoribonuclease/protein kinase IRE1-like |
| 9 |
Ahg338999 | Protein kinase superfamily protein |
| 9.53939 |
Ahg895977 | RNA polymerase II transcription mediators |
| 10.4881 |
Ahg317759 | Lipin family protein |
| 12.6886 |
Ahg939838 | NAC domain containing protein 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|