Detail


ID : Ahg485693

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485693|fgenesh2_kg.5__1685__AT3G53180.1
Sequence
GCCGCCGACC AAATCAGACA ACGAAAAGTC AACGATTTCG ATCTTCTTCA CTCATGCTTT ATTGTAAGAA GATGAGATGG AGTTTAAGGA GTTAAAAGAA GCAATAGAGA AGATAGAGCT CGTTGATGCT CACGCACACA ACATTGTCTC TCTTGATTCG TCTTTCCCGT TCATCGGAAC TTTCTCCGAG GCTGCCGGCG AAGCTTTAAC CTTCGCTCCT CATTCTCTCT CTTTCAAGAG GAATTTGAGG GAGATTGCTC AACTCTATGG CACTGAAGTA TCTTTAGAAG CGATTGAGGA ACATCGTAAA ACCTCGGGTT TGGATTCTTT TACTTCCAAG TGTTTTAAAG AAGCTCGAAT CTCTGCTCTC CTCATTGATG ATGGATTGAA GCTAGACAAG AAACATGACA TTGAATGGCA TAGAAACTTT GTTCCATTTG TTGGTCGAGT CTTGCGTATC GAAACTCTCG CCGAGCAAAT CCTCGAAGAG GAGTGTCCTG ATGATGGTTA TTTCTATGGT TCTAAGAGTA CTGAACCGCC TGTTTGGGAT TTGGATTCTT TCACAAAAAC CTTTGTTGAA AGATTAAATT CGCTTGTTCC AAAGATTGTT GCTTTGAAAA CTATTGCTGC TTATCGTAGC GGTTTGGATA TTGATACTTA TGTGAGTAAA GCTGTTGCTG AGAATGGCCT AGTTGAAGTC TTGCGAGCTG GAAGTCCTGT CCGTATAGGA AACAAAGGCT TGATTGATTA CATTGTTACC ATTAGTTTGG AGGTCGCTGT GCGTCGCGAC TTGCCCTTGC AGATTCACAC CGGTTTTGGT GACAGGGATT TGGATTTGAG GTTGTCAAAT CCTCTTCACC TTAGAAACCT TCTTGAAGAC AAAAGATTTG CAAAGTGTCG TATCGTTCTT CTTCATGCAG CTTATCCATT CTCAAAGGAA GCATCCTTTC TGTCTTCAGT TTATCCTCAG GTTTACCTTG ATTTCGGCTT GGCGGTTCCA AAGCTTAGTG TCCATGGTAT GGTTTCTTCA GTTAAAGAGC TCCTTGACTT AGCCTCAATA AAGAAGGTTA TGTTCAGCAC TGATGGGTAT GCATCTCCTG AGACCTACTA TTTAGGTGCA AAGAAAGCAC GTGAGGTCAT CTTCTTAGTT CTGAGTGATG CGTGTGCCAG TAGTGATCTC TCACTCATGG AAGCTATTGA TGCAGCTAAA GACATTTTTT CACGAAATTC GATTAAATTT TATAAGCTTA AAATAGACTC AAATTCTTGT AGTCCACAAA GTATAATATC TCCCAAATTA GAGATGAAGG AGCCTGATGT TCAAGAAGAT AGTAGTTCTT TTGTACGCAT TATTTGGGTT GATACATCTG GACAACAACG ATGCCGTGCT GTTCAAGCGC AGCGTTTTAA CAGAAGTGTG AAGAAGAACG GCGTCGGTCT GACTTTTGCA TCAATGGGGA TGACTTCATT TACTGATGGA CCAGCAGAAG AGTCTAATTT GACGGGTGTG GGTGAGATTA GACTGGTTCC AGATCTCTCA ACCAAGCAGA CAATACCTTG GACGAAGCAA GAGAGCATGG TTTTAGCTGA CATGCAATTG AAGCCTGGTG AAGCATGGGA GTACTGTCCA AGAGAGACCT TAAGAAGGGT CGCAAAAGTT CTCAAAGATG AATTTAACTT GGTAATGAAC GCTGGTTTTG AGAATGAGTT TTATCTCCTC AAAAACGTTG TGCGGGAAGG GAAAGAAGAG TATGTGCCTT TTGAATTTGG TCCTTACTGT TCCACATCCT CATTCGATGT TGCATCTCCG ATTTTCCACG AAATTGTACC CGCGCTCGAG TCCTTGAACA TTGAAGTTGA ACAGTTTCAT GCTGAATCCG GGAAAGGTCA GTTTGAAGTA TCTCTCGGTC ACACCGTTGC ATCCCATGCT GCCGATAACT TGGTTTACAC ACGTGAAGTT ATAAGAGCGG TTGCAAGAAA ACATGGACTG CTCGCGACCT TTGTTCCAAA GTATGATTTT TGTGACATTG GTTCTGGATC ACATGTGCAT CTAAGTCTTT GGAAAAACGG CGAAAATGTC TTCCCGGCAT CTAATAACTC ATCTGCTCAC GGAATCTCTT CCGTTGGGGA AGAGTTCATG GCCGGAGTTC TATTTCACCT TCCATCAATC TTAGCAATTA TAGCTCCACT CCCAAACAGC TATGACCGAA TCCAACCTAA TACATGGAGT GGAGCATTCC AATGCTGGGG CAAAGAAAAC CGCGAAGCGG CAATAAGAGC AGCTTCTCCA CCAGGAACTC CTGATGGTTT AGTTACTAAC TTTGAGATAA AGTCTTTTGA TGGCTCTGCA AATCCTCACC TTGGTCTGGC CGTTATAATG GCTGCCGGTA TTGATGGTCT CCGGCGACAT CTCCAACTTC CTACTCCAAT AGATATAAAT CCGGCAGATG TGGCTGCTAC ATTGAACAGA CTTCCTGAAA CGCTCTCAGA AGCTGTTGAA GCTCTGGACA AAGACGAAGT TCTCCACGAT TTGCTTGGAC AAAAGCTTTT AGTTGCCATA AAAGGAGTCC GTAAGTCTGA GTTTGAGTAT TATTCGAAGA ATCCAGATGC ATATAAGCAA CTCATTCACA GATACTAATC CTTTGAGCAT CTGGATGATG ATTGTTCGAT CATTTGGTTT TATTGTGGAC TTTGTGTCAC ATGAAGGGTC GTATTTGCAA AATACTTGCC TACTTAAAGA TGTGGATCAG AAATTTTTTT AACTAAATTT CATATTTCGA GACGCATGCT CATGCTGAAG TATTTCTTAC TTTTTCTTCC CATGCTTTCA AAAGCCTCAA GAATAT
Length2846
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15563053.. 15567534
Download Sequence
A.thaliana
AGI-codeAT3G53180.1
Descriptionglutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
TAIR curator summary
Alias[NodGS][nodulin/glutamine synthase-like protein]
Gene coexpression
MR
MR Locus Description
6 Ahg485217 nuclear factor Y, subunit C1
8.66025 Ahg327329 Disease resistance protein (TIR-NBS-LRR class) family
10.4881 Ahg487264 pentatricopeptide (PPR) repeat-containing protein
11.9583 Ahg488087 DNA binding;zinc ion binding;DNA binding
14.4222 Ahg488256 Flavin containing amine oxidoreductase family
18.1659 Ahg495232 cleavage and polyadenylation specificity factor 160
28.4956 Ahg888526 chloride channel E
29.5635 Ahg920634 Leucine-rich receptor-like protein kinase family protein
31.8434 Ahg944166 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
32.218 Ahg478791 Root hair defective 3 GTP-binding protein (RHD3)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression