| Annotation |
|---|
| Description | jgi|Araly1|495232|fgenesh2_kg.8__1048__AT5G51660.1 |
| Sequence |
GAATCTCTGA ATCCCAGATT CCGGTGGAGA AGATGAGTTT CGCGGCCTTT AAGATGATGC ATTGGCCGAC CGGCGTTGAG AACTGTGCTT CCGGCTATAT CACCCACTCT CTCTCCGATT CAACGCTACA GATTCCAATT GTTTCCGGCG ATGATGATAT GGAAGCCGAA TGGCCTAATC ATAAACGAGG TATCGGTCCA TTGCCTAACG TCGTTATAAC CGCCGGAAAT ATCCTTGAGG TGTACATCGT TAGGGCTCAA GAGGAAGGGA ATACTCAGGA GTTGAGGATT CCGAAGCTTG TTAAGCGCGG TGGAGTTATG GATGGTGTCT CTGGTGTTTC TCTCGAGCTT GTGTGCCATT ATAGGTTGCA CGGTAATGTT GAGTCAATTG CGGTTCTACC TATGGGAGGT GGTAATTCTT CTAAGGGAAG AGATTCGATT ATACTGACAT TTCGCGACGC CAAAATTTCG GTTCTTGAGT TTGATGATTC AATTCACAGC CTTAGAATGA CTTCGATGCA TTGTTTTGAG GGTCCAGATT GGCTTCATCT GAAAAGAGGA AGAGAGTCTT TTCCAAGTGG CCCTTTGGTA AAAGTGGATC CTCAAGGTAG GTGTGGCGGC GTTCTTGTTT ATGGTTTGCA GATGATCATA CTCAAGGCTT CCCAGGTTGG TTCTGGACTA GTTGGAGATG ATGATGCGTT CAGTTCTGGA GGGACAGTTT CTGCTCGAGT TGAATCATCT TACATAATTA ACTTGCGTGA TCTGGAAATG AAACACGTCA AAGATTTTGT TTTTCTACAT GGTTATATTG AGCCTGTAAT TGTCATCCTT CAGGAAGAAG AGCATACTTG GGCTGGGCGA GTTTCATGGA AGCACCATAC TTGCGTGCTA TCTGCCCTTA GTATCAATAC AACATTAAAA CAACACCCAG TCATCTGGTC AGCTATTAAT CTGCCCCATG ATGCCTACAA ACTACTTGCA GTACCATCTC CGATCGGAGG TGTTCTTGTG TTGTGTGCAA ATACAATCCA TTATCATAGT CAGTCAGCCT CCTGTGCGCT GGCACTGAAC AATTATGCCT CCTCAGCTGA TAGCAGTCAA GAAATGCCTG CATCAAATTT CAGTGTGGAA CTCGATGCTG CCCATGGAAC CTGGATATCG AACGATGTTG CCCTATTGTC AACGAAATCT GGGGAATTGT TGCTGCTGAC TCTTATATAT GATGGGCGTG CTGTACAGAG ACTTGATCTT TCCAAATCAA AAGCCTCTGT GCTTGCTTCG GACATTACTA GTGTTGGAAA TTCCCTTTTC TTTTTAGGTA GCCGGTTGGG AGACAGTTTA CTGGTGCAAT TTTCTTGTAG ATCTGGGCCT GCAGCATCAT TACCTGGGTT GAGGGATGAG GATGAAGACA TTGAAGGTGA GGGTCATCAA GCAAAACGTT TGCGGATATC TTCTGACACT TTTCAAGATA CAATTGGAAA TGAGGAGCTT TCATTGTTTG GTTCAACTCC AAATAACTCT GATTCAGCAC AGAAATCGTT TTCATTTGCA GTGAGAGATT CACTAGTTAA TGTTGGCCCA GTGAAAGATT TTGCGTATGG CTTAAGGATT AATGCTGATG CAAACGCCAC TGGGGTTTCC AAACAGAGCA ACTATGAATT GGTGTGCTGT TCTGGTCATG GGAAGAATGG TGCTTTATGT GTTCTTCGGC AGTCAATTAG ACCGGAAATG ATTACTGAGG TTGAACTTCC AGGGTGCAAA GGAATATGGA CAGTTTATCA CAAGAGCTCC CGTGGTCATA ATGCTGATTC TTCTAAAATG GCTGCTGATG AAGATGAATA TCATGCCTAT TTGATTATAA GTTTGGAGGC TCGCACGATG GTCCTTGAAA CTGCTGACCT TCTCACAGAA GTCACTGAGA GTGTTGACTA TTATGTTCAG GGAAGAACAA TTGCTGCTGG AAATCTATTT GGAAGACGTC GGGTAATCCA GGTGTTTGAG CATGGCGCCC GTATTCTGGA TGGTTCTTTT ATGAATCAAG AATTAAGCTT TGGAGCTCCT AATTCAGAAT CCAATTCCGG TTCTGAAAGT TCCACTGTGT CATCTGTTTC AATCGCTGAT CCATATGTTT TACTTAGAAT GACAGATGAC AGTATTCGTC TGCTTGTTGG AGATCCTTCG ACTTGCACAG TTTCCATAAG TAGTCCATCT GTACTTGAAG GCTCCAAAAA GAAGATATCA GCGTGTACCT TGTACCATGA TAAAGGACCA GAACCATGGC TAAGGAAAGC TAGCACTGAT GCATGGCTTT CATCAGGAGT TGGAGAGGCT GTTGATAGTA CTGATGGTGG ACCTCAAGAC CAGGGTGACA TATACTGTGT GCTCTGTTAC GAAAGTGGTG CCCTTGAGAT ATTTGATGTG CCTAGTTTTA ATTGTGTTTT CTCTGTTGAT AAATTTGCGT CTGGAAGACG CCACCTCTCT GATATGCCTA CTCATGAGTT AGAGTATGAA CTCAACAAAA ACTCCGAGGA TAATGCTTCG TCAAGGAATG AAGAGATAAA GAATACAAAG GTCGTTGAGC TAGCTATGCA AAGATGGTCT GGGCCTCATA CACGCCCATT TCTCTTTGCA GTATTGGCTG ATGGCACAAT TCTTTGTTAC CATGCTTATC TATTTGAGGG TGTTGATAAT ACCAAAGCAG AAAATAGTGT ATCTTCAGAA AATCCTGCTG CTTTAAATTC CTCTGGTAGT TCTAAGCTTA GGAATCTGAA ATTTCTACGC ATCCCCTTTG ACACGTCTAC GAGAGAGGGG ACTTCAGATG GAGTTGCATC TCAAAGAATT ACCATGTTCA AGAATATTAG TGGTCACCAG GGGTTTTTTC TTTCTGGCTC AAGGCCGGGT TGGTGTATGT TGTTCAGAGA GCGACTCCGA TTTCATTCAC AGCTGTGCGA TGGATCAATT GCGGCCTTTA CTGTTCTTCA CAATGTGAAT TGCAATCACG GGTTCATATA TGTCACATCA CAGGGAGTTT TGAAGATTTG CCAATTACCT TCAGCATCAA TCTACGATAA TTATTGGCCA GTGCAGAAGA TTCCTCTGAA GGCCACGCCT CACCAAGTTA CCTACTACGC GGAGAAGAAC TTGTACCCGC TGATTGTATC ATATCCAGTC AGCAAGCCGT TAAATCAAGT TCTTTCTTCA CTAGTTGATC AAGAAGCTGG CCAGCAGATT GACAACCACA ATCTGACCTC AGATGATCTC CAACGAACAT ACACTGTAGA GGAATTTGAA ATCCAAATTT TGGAACCAGA AAGATCTGGT GGCCCCTGGG AAACTAAAGC CACTATCCCA ATGCAGAGCT CAGAACATGC ACTGACTGTG CGAGTTGTCA CACTTCTTAA TGCAAGCACA GGGGAGAATG AAACACTTCT TGCTGTTGGA ACTGCCTATG TCCAAGGGGA GGATGTTGCT GCAAGGGGCC GTGTGCTTCT TTTCTCTTTT GGAAAAAATG GCGATAATTC TCAAAACGTG GTTACTGAAG TCTACTCAAG GGAGCTAAAA GGTGCTATAT CAGCTGTAGC CTCCATTCAG GGTCATCTTC TAATATCATC TGGTCCTAAA ATTATCTTGC ACAAATGGAA TGGCACCGAA TTAAATGGTG TTGCCTTCTT TGATGCTCCA CCGCTCTATG TAGTCAGCAT GAATGTTGTA AAGACTTTCA TCCTTCTTGG TGATGTTCAC AAAAGCATAT ACTTTCTTAG CTGGAAGGAA CAAGGGTCCC AACTTAGCTT ACTAGCCAAA GATTTTGGAT CCCTCGATTG TTTTGCTACA GAGTTCTTGA TTGATGGAAG TACACTTAGC CTGGCTGTCT CCGATGAACA AAAGAATATC CAGGTATTCT ATTATGCACC AAAGATGGCT GAGAGCTGGA AGGGTCAGAA ACTTCTTTCA AGGGCGGAAT TTCACGTTGG TGCCCATGTG ACAAAGTTCC TACGTCTGCA GATGGTTACT TCTGGTGCGG ATAAAACAAA TCGATTTGCT TTGTTATTTG GTACTCTAGA TGGCAGTTTT GGTTGCATTG CTCCACTCGA TGAGGTCACA TTCCGGAGGT TACAGTCTCT CCAGAAAAAG CTAGTGGATG CTGTTCCTCA TGTTGCGGGT CTGAACCCAC ACTCTTTCCG TCAGTTCCGC ACAAGTGGGA AGGCTAGACG ATCTGGGCCT GACAGCATAA TCGACTGCGA GTTACTATGC CATTACGAGA TGCTTCCATT GGAGGAACAG CTTGAACTTG CTCACCAGAT TGGGACAACC CGGTCTGTAA TTCTCTTGAA TTTAGTTGAG CTCTCTGTCG GAACCAGCTT CTTGTAAAAG ATCAAAGAAA AAGGCAGATT GTAATGCGTT GTTCATCCGA GAGAAAAAAA AGGCAGAGTT GCTTAATATG TTGTACAAAT GCTGTAACAG TACACAATTA TATGAAATTT GATGTTCAAT GGCATTTAGA TTATGTTAAG ATTCTTCTT |
| Length | 4519 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 13774868.. 13783921 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G51660.1 |
| Description | cleavage and polyadenylation specificity factor 160 |
| TAIR curator summary | |
| Alias | [ATCPSF160][CPSF160][cleavage and polyadenylation specificity factor 160] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.87298 |
Ahg950867 | U5 small nuclear ribonucleoprotein helicase |
| 4 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 6 |
Ahg928372 | NHL domain-containing protein |
| 6.32456 |
Ahg476360 | pumilio 23 |
| 7.4162 |
Ahg492104 | Galactosyltransferase family protein |
| 10.0995 |
Ahg934834 | |
| 15.8114 |
Ahg479588 | F-box family protein-related |
| 16.1555 |
Ahg476410 | Homeodomain-like/winged-helix DNA-binding family protein |
| 17.1756 |
Ahg322431 | tubby like protein 3 |
| 17.3205 |
Ahg942570 | Ubiquitin carboxyl-terminal hydrolase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|