| Annotation |
|---|
| Description | jgi|Araly1|488087|fgenesh2_kg.6__1221__AT5G12400.1 |
| Sequence |
ATGGAGTTGG TGGGTAAAGT CGTTCGGAAG GAGATCCAAG GGATTGGGTT TTGCTCCGGG ACGGTTCGAT CTCGCGATTC GTCTGGAGTT TTCGAGATCG TTTACGAGAA CGGAGTCACG GAGATTTCGG AATTGGATGA GGTTGTTGCT CTCGTCATGG GAGATGGTAA ATCTCAGGAG AATTCGGTTC CAGTGAAGAA GAGAGTTGGT AGGAAGCCGA AGAAACGGTC TCGTGTCGCG AGGATGGTTG AGATCAAGCG AGAAAGCTCT GAGTTGGATG AGGTAAATGT CGATTTAAAT GATGGAGTTA CGGAGATTTC GGGAGTTAGT GATGTGAATT TGAGAGGGAA TGTTGATTTG AATTGTGGTC CTGTGGAAAC CCTAGGTAGG ACATGTGACT CTGTGACGGA TTTGAATAGG ACGGTGCCGC AATCGGAAAC TGGGTTTGAT CTGACTACCG GGTTGGATTG GAATTCCAAT GAAGGTTTAG GTTTGATTAA TGTGAATATC GATTATGAAG ACAATTGTAG TGACAAAAGG AGGTGGGATA TTGATCTGAA CATGGATGCG AGCTGTGATT TGGACAATGC TGCTGTCTGT AATTTCAATG GGCAGAAGAG GGAGGGAGGA TTTGATTTGA ACGTGGAGGT TGATGTAGAG AACAGCAAGG ATGGCGAGTA CATTCAAATG AATGGAAATG ACATTGTTCA GGAAATCAAC ATGCAAGACG GAAATGTTGT CCATGATAAT ATTGAGACTG GGGAATATAA AGAAGTTCAT GTTGCTGAAG TGTCCAGCGC TCAGCTTTTG GAGGAGATAC AGAAGCAGAA CATTGTTTCA CCGCAAGATC CCAATAATCC TAATTCTAAT GGGGTTGAGC AAGATCATGA GCTACCTCAG CATGATGCTA AGACTGTTGA TGAGTCTCTA TCTGATAGGG GAAATTCAGA TGAATATGGA AGTGGTAGGA GGAAAAGAAG AAAACCTTCT GACAATCCAA AATTCATGAG TGAACCTCGG TTGAGAAGAA GCGCTCGTAG AAGGTTAGCT CGATCTCCTG TCAGTAGTAC TGTAACAGCG TGCTTAGTTG ATGAAGTATC CCCTTCTCCT TCAATTAGTA GTCTGACAGA GGAGAAAACT TGGGTCGATG GAAAAGCTGA GAATATTTCT GCCCTCCCGC CAAAGCCACA ATTACCTCCA TCCTCCCATA TTTTGGATTT AGATGGTCTT CCCGTACTTG ATGTCTTTAC TACTTACTCT TGTCTGCGGT CCTTCAGTAC TTTGCTGTTT TTGAGTCCCT TTGAGCTGAA AGATTTTGTG GAAGCATTGA GGTGCATGTC TCCTAGTCTA TTATTTGATA GCATCCATGT TTCTGTCTTG CAAATATTAA GAAAACATTT GAAACAACTC GCTGCTGAAG GTGAACTATC TGCGTCTGCT TGCCTGAGGA GTCTTGATTG GGATACGTTG GATGTGGTCA CATACCCCCT TTTTGTGGTT GAATACCTAC TATTTTCTGG GTACAAAGAC AACCCTGGAT TGGATCTTAC TCGGTTGAAC TTTTTCAGAA ACGAGTATTT CAGACAACCC ATGAATCTGA AAATTGAGAT ACTTAGTCGT TTGTGCGATG ATATGACAGA TGCTGAAGTT GTGAGGTCAG AGCTTAATAA AAGATCTTTT GCAGCTGAGT TTGAAACGGA ACTTGATAGG AAGACAAACA CAGAAGTTCG ACGCAGAAAG CGAACTATGA TGGAGCTGGC AGATGATTTA TCTTTTAATA ACGAGGTCAT TGATACCTCA TTTGACCGGA ACAGTGACGA CTGCTGTTTT TGTAAAATGG ATGGGAGCTT ACTGTGCTGT GATGGTTGTC CGGCTGCATA TCATTCTAAG TGTGTCGGTC TTGCCAGTCA CCTTTTGCCT GAGGGTGACT GGTACTGTCC TGAATGTGCA TTTGATCGGC GTGTACCAGG ATTGAAGCCT GAAAAGCAAA TTCGAGGCGC AGAGTTTATA GAGATTGATC CCCATGGTCG AAAATACTAC AGCAGTTGTG GCTACTTATT GGTGATAGAT ACAGATGGCA CAGGCTCATT TAACTACTAT CATGTGAATG ATGTGAACCT TGTGCTGGAA CAGCTAAAGT CATGCAGTAG TTTCTATAGT GGCGTAGTAA GGGCAATTAA AAAACACTGG GATATCACTG TTGGGCCAAT AAGGACAATC AGCGGTGTGA ATTCCCAAAT GTCTGTATGC CTGGATAAGT CTGTCAAAGA AATGATTCCT TCTATTGATG GGTTTAAGGC TCCTCTACCA GCTTCAGAAA AACAGTCAAC ATCTGGTGCT AAAAAAAAGC TGAACAAAGC ATCCAGCAAT GGATGGTCAC ATAATCATGG TCCTAGGACT CGTCGGAAGA TATTAGATTC AGCTACTGGG CTAGATATCC TTAATATGAG TTCTGAAGGA TCTGCTGAAA CTGTACAAAA TGGATCAGAC GTCCAGAGAC TTCATGAGCC AGCATCATCA AGCATTTTGG ATATCATGGA AGAGCCAAAT ATGAATTCCC ATAATTTGGC TAGAATAAAC ACACGGAAAG GAATTAAACC AAATGTGCAG AGTGAAACAG GCTACAGAAA CCATTACATA TTTGCTCAGA TGACTAGATC AGTTTATGAA GAGATGATAC GTAAGTCACC AATCCGTACC AATGATATGA GATCTGATGA AGAAATAGCT TCTACCCAGG TGAAGACTAT ATTGATGAAA ACCACCAAAT TTCAATGGCG AAACATCCAA AGCCTCTACC TAGATGCGTG GAAAGAAAAA TGTGGATGGT GTCATTCCTG CAAAAGTTCT TCTGAGGATG CTGGTAGTGA GATAAATTGT TTGTTTAATA TGAGTCTTGG GGCTTTACGA GGTCTTTCGG AAAGTGAAGT AGCTAACATT CAATCCATTG AGAAGAACAG TCATCTTTTG GCCATCATAT GCCAGATACT TTCCATGGAA AGTCGACTGC AAGGACTCTT GGTTGGTCCA TGGTTGAATC CGCAGCACTC CGGCATTTGG CGTGAACACA TTCTGAAGGC ATCAAATATC TCAAGCTTGA AACATTTATT GGTTGAATTA GAGGCAAGTT TGCATCATCG TGTACTTTCA CTTGAGTGGC TAAGCCATGT CGATGCTGCC GTGGTAATGG GATCAGCAAT ACATATTCTC ATTGCTTCGA CACGATCATG GTCAAAGACT GCTATTGGTA AAAGAAGGGG GACATTGTTG GAGTCTGGGG TTAACCCTAC TGCAAAGAAA AATGGTGGAT TGACCATGTG TTGGTGGAGA GGTGGGCAGC TCTCACGGCG GTTATTCAAT TGGAAGGTTT TACCTCGCTC TTTAATCTCG AAGGCTGCTA GACAAGGTGG AAGTATGAGT ATTCCAGGAA TATTGTATCC TGAGAATTCA GAGTCTGCTA AGAGAAGCCG ACGTGTTGCC TGGGAAGCAG CTGTTGAGTC ATCTACGACT TCAGAGCAGC TCGGTTTGCA GGTGAGGACA CTCCAATCTT ACATAAAGTG GGATGATATT GAAAACAGTC ATCTTCTTCC TACATTGGAC AAAGAATCCA GAAAATCTAC CAGGCTATTC AAAAAAGCGA TTGTCCGTAG GAAGTGCACG GAGGAAGAGA CTGTGAAATA TCTCCTTGAC TTTGGTAAGA GGAGAAATAT TCCGGATGTT GTGTCGAAGA ATGGTTGCAT GGTTGAAGAA TCCTCGAGTG GAAGAAAAAA GTTCTGGCTG AATGAATCAC ATGTGCCTTT ACATCTTATG AAAGGATTTG AAGAGAAAAA AGCTGTACGG AAAACTAGCA AGTCAGGAGG CTCTTTCAGA CACTCTGAGA TACACAAATT ACGGAAAAGG TCCTCAGAGG GAAAAGGATT CTCATACCTA TTTGAAAGGG CAGAAAGATC TGAATCCTCT TTGTGTGAGC AATGTAAGAA AGATGTGCCT TTGAGTGAAG CTGCAAGCTG CCACATCTGC AAAGGAGTAT TTCACAAAAA GCATATAAAG AGGGCAGAGA AGGAGGGCAT GTACATCTGT CTTCCATGCA GAAGTGAAGT GATAGCAAAA GAACAACCCA CCGTACGAAA AAGAGGGCGG CCGCCAGGGA GTTTCCGGAA AAAAATTGGA GTTCAGACAC AAAAGCGTAA AAAGGTCATA CCTGCTCGCA AATCACCTCG GCTAAAGAAG ACTAAGACCT CAATGGCAGA GAGAATTGCC ATAAGGTTAA AGAATCATAA AAAGGTTGTT GCAAGCAAAC CATTGCGACG TTCTGGCAGG CAATTGAAGC ATGTTATTCG GCTGCAGGAT GAAAGTAAAG TTCCTGAAGG GAGTAAGAAA CGGAAACTGG AAACCAAAAG AGGTAGAGGC AGACCTAAGA AAGTAAAACA AGAGATCTCC ATTAGAAAGG AGAGAACAGA TAGGTGTTTG AGCTATTGGT TGAATGGCCT CCTTTTGTCC AGAAAGGCTG ACGATGAACG GGTTCATAAG TTCCGGAAAG ATAGATATTA TATTCCCTTG GAGAACTCTG ATTCTGATCA TGATCAACCT AAGTGTCACT TATGTGGCCC AATTGAATCT GAATCTGGAT CAACTTTCAT TGCTTGCGAA ATCTGTGGAG GTAATCCATT TTCCGAGCTT CTTTTGGTTC ACGTTGCTAG GGTTGGTTTC TTTTCAATGG TACCACGGAG ATGCTTATGG GCTTAA |
| Length | 4746 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4842106.. 4848851 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G12400.1 |
| Description | DNA binding;zinc ion binding;DNA binding |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg336766 | Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein |
| 6.9282 |
Ahg484159 | |
| 7.07107 |
Ahg930843 | DNAJ heat shock N-terminal domain-containing protein |
| 11.1355 |
Ahg334090 | tyrosylprotein sulfotransferase |
| 11.9583 |
Ahg485693 | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases |
| 15.0997 |
Ahg925208 | binding |
| 15.2971 |
Ahg937129 | metalloendopeptidases;zinc ion binding;DNA binding |
| 17.6635 |
Ahg939518 | LMBR1-like membrane protein |
| 21.4476 |
Ahg475737 | Signal transduction histidine kinase, hybrid-type, ethylene sensor |
| 25.6125 |
Ahg924663 | Zinc finger, C3HC4 type (RING finger) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|