Detail



ID : Ahg485718

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485718|fgenesh2_kg.5__1710__AT3G53440.2
Sequence
TAGGGTTTTA CGGATCTGCG ATAATCATTG TTCTGGTTCG TTGAAATGTC GAGAAGAAAA TCCACCGTCG TCTTGCCGCA ACCCATTCGT CGATCAGCGA GGCTTATCTC TATGCAGAAT CGAGATAGTC AAGTAAAACC CAGGAAAGAT CTGGTCTTTG GCTCGGAACC ACCGAAGAAA ACTCGTCGGG AAGTCCTACG AGGACTATCG AAGAGATTAG TATACTCATT GGATAGTCCA ATCGCGAAGA AATCTCTGGG ATTGAACATT TCCAAGGATG GGTTTCCTAC GCTGAGGCGA TCTCTTAGGC TTTCGAGTAG GGAATGCTGT GGTGTTAATA AAGAGAAGCC TTTTACGAAG AAGACTGCAT CTACTTCATC TTCTCGCACG AAATCTTCGG CCACTGTTTC GTCTTGTTCT CTGAGACGGT CTCCTAGGTT TTCAAGTGGA GGAGGAGGAT CTGTGGATCA ATCTTCTTCT TCCATTGGGT GGAAATCAGG TAATAGTGTT TTGAGTAGAT GTAGTACGAA ATCAATTTCT TCTGAGAAAG GGAAAGGTGG GGATGGTGTG AAAAGTAAGG ATAGAAGTAG AAGTCGTCTT CGTCCTAAGT CTAAGCAGTT GTTTAGTGGT TGTGATGATA ATGAAGAAGA AGGAGAAGTT AGTGTCTGTC TTAGTGAGAG GAAAAGGATG AGAATTGCAA AACCGAATGA GGAAGAAAAT GTTGTGCCAA AAGCTGATGA AGTGAAGAGA AAAGGAAAGG ATGAAGAAGA AGATGATGAA GAAGAAGAAG ATGGATTGAA GACAAAGAAG AAGCTTGAGA AAGGAGGATG GACAGAGGAG TTGGAGTTAG CTTTACAAGG AGCTTATTTG ACGGTGAAGC CGAGTCCTAA TTTCTGGAAA AAAGTTGCTA AGATGGTACC TGGAAAATCT GCGCAGGAAT GTTTTGATAG AGTGAACTCA GCTCTGATCA CTCCTCGTCA AGCTCAGCCT CGAAGAGCAA GGAACACAAA CTTATCAACA ATCCCGCAGT TTTCGCTCTC TGCAAGCAAA CTACTGAAAC CCAATTCACC AAAGACAAAG ATACGACAGC GCAGAAACAA TCTCTCAAAG AAAGTGGTCA GGCATTTACT GGAGAAGCAA AATCATATGG ATCAAGGTCT TGGATTTGAT CTATTCTCCG TTCTTGAGCC TAACACCACA AGCAATTTTC TCTCTACTCC AATGGAGAAA GGGCAAAGTC TTCCAAAAAT CCTTGAAAGT CCAGTGCCTT GTTCAAGTAA AGATCCAACA ACTCTCGTTA GCCCTCCAGT ACTAAAACAG GTAAAAAACA AGGCATTGCA TGAGAAGTAC ATTGATCATC TGCATATCAG GGAAGCTAAA AGAAAAGCCG AGTCAACTCG ACTGGCTGGG AAAGAGAACA TAAGACCTAT TGAAATTCAG AAGAAGGATT CAGTGAGAGC AGCAAAGGAT GCCCTTTTCT TTGATGTACA AGATGCAATC CAAAAGCTAA AGGGTCTGGA AGCTGAGAAC TCATCTAGTT CTTCAGAGTT TTGCTATGAT CATGGCGAAA ATGACGAAGA AGATGAAATC TAG 
Length1593
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15674121.. 15675821
Download Sequence
A.thaliana
AGI-codeAT3G53440.1
DescriptionHomeodomain-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15 Ahg471347 Transcription factor jumonji (jmjC) domain-containing protein
16.7332 Ahg906204 myosin heavy chain-related
32.4962 Ahg489124 DNA/RNA helicase protein
32.7872 Ahg473819
33.4664 Ahg490285
35.8329 Ahg947629 myb family transcription factor
38.6782 Ahg945561 AT hook motif DNA-binding family protein
44.7884 Ahg478984 Transcription factor TFIIIC, tau55-related protein
46.1736 Ahg491024 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
50.8331 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression