Detail



ID : Ahg945561

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945561|scaffold_701790.1
Sequence
TCACTTGATC TTATGTCCGG ATGGAGGAGA GAGAAGGAAC CAACAACAAC AACAACACAA GCAGTTTCGG CTTGAAGCAA CATGAAGCTA CTGCTTCTGA TGGTGGTTAC TCAATGGACC CACCACCACG ACCCGAAAAC CCTAACCCGT TTTTAGGCCA ACCCACCACT GTATCCGCCG CCGCCACCGT TGCAGCCGTT ACTGAGAATG CGGCTACTCC GTTTAGCTTA ACAATGCCGG CGGAGAACAC TTCCTCTGAG CAGCTGAAAA AGAAGAGAGG TAGGCCGAGA AAGTATAATC CCGATGGGAC TCTCGCCGTG ACTCTATCGC CGATGCCAAT CTCATCCTCG GTGCCGTTGA CGTCGGAGTT TCCTCCAAGG AAACGAGGAA GAGGACGTGG CAAGTCTAAT CGATGGCTCA AGAAGTCTCA AATGTTTCAA TTCGATAGAA GTCCTGTTGA TACCAATTTG GCAGGTGTAG GAACTGCTGA TTTTGTTGGT GCCAACTTTA CTCCTCATGT ACTGATCGTC AACGCCGGAG AGGATGTGAC GATGAAGATA ATGACATTCT CTCAACAAGG ATCTCGTGCT ATCTGCATCC TTTCAGCTAA TGGTCCCATC TCCAATGTTA CTCTTCGTCA ATCTATGACA TCCGGCGGTA CTCTAACTTA TGAGGGTCGT TTTGAGATTC TCTCTTTGAC TGGTTCGTTT ATGCAAAATG ACTCTGGGGG AACTCGAAGT AGAGCTGGTG GTATGAGTGT TTGCCTTGCA GGACCAGATG GTCGTGTCTT TGGTGGAGGA CTCGCTGGTC TCTTTCTTGC TGCTGGTCCT GTCCAGGTAA TGGTAGGGAC TTTTATAGCT GGTCAAGAGC AGTCACAGCT GGAGCTAGCA AAAGAAAGAC GGCTAAGATT TGGGGCTCAA CCATCTTCTA TCTCCTTTAA CATATCTGCA GAAGAACGGA AGGCGAGATT CGAGAGGCTT AACAAGTCTG TTGCTATTCC TGCACCAACT ACTTCGTACA CGCATGTAAA CACAACAAAT GCGGTTCACA GTTACTACAC AAACTCGGTT AACCACGTCA AGGATCCCTT CTCGTCGTCC ATCCCAGTAG GAGGAGGAGT TGGAGAGGTA GGTGAAGAGG AAGGCGAGGA AGATGAAGAA GATGAGGATG AATTAGAAGG TGAGGAGGAA GAATTCGGAG GCGATAGCCA ATCTGACAAT GAGATTCCGA GCTGATGATC CTACGGTTTC TTTTC 
Length1255
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6704162.. 6706072
Download Sequence
A.thaliana
AGI-codeAT4G25320.1
DescriptionAT hook motif DNA-binding family protein
TAIR curator summary
Alias[AHL3][AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3]
Gene coexpression
MR
MR Locus Description
7.4162 Ahg495573 DEA(D/H)-box RNA helicase family protein
7.74597 Ahg919082 translocase of outer membrane 22-I
11 Ahg476612 Pentatricopeptide repeat (PPR) superfamily protein
11.3578 Ahg470832 RNAligase
23.7487 Ahg343136 UDP-glycosyltransferase 73B4
24.7386 Ahg477786 ARM repeat superfamily protein
24.8193 Ahg482284 RNA-binding (RRM/RBD/RNP motifs) family protein
30.9839 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
31.1769 Ahg485785 Mitochondrial substrate carrier family protein
31.6228 Ahg482616 growth-regulating factor 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression