Detail



ID : Ahg485747

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485747|fgenesh2_kg.5__1739__AT3G53610.1
Sequence
AAACAAAAAA AAATCTTCTG AATCTCCGAA AAAAGCCGAT CGGGAGAAGA AAATAATTCA ACGGCCGTCC GGTTACTGTC TTGCTCCGTT CCGACGATCT ATCTTCCCCG AGTAGATCTG AAATGGCTGC TCCTCCTGCT AGAGCTCGTG CTGATTACGA TTACCTCATT AAACTTCTCT TGATCGGAGA CAGCGGTGTT GGTAAGAGTT GCCTTCTCTT ACGTTTCTCA GATGGCTCGT TTACCACCAG TTTCATTACA ACGATTGGAA TTGATTTCAA GATAAGGACT ATAGAGCTCG ATGGGAAGAG AATTAAGCTG CAAATCTGGG ATACTGCAGG ACAGGAGCGG TTCCGCACAA TCACAACTGC GTACTACCGT GGAGCCATGG GAATTTTGCT TGTGTATGAT GTGACCGATG AATCATCTTT CAACAACATC AGGAATTGGA TCCGTAACAT TGAGCAGCAT GCTTCTGATA GTGTCAACAA GATTCTAGTT GGGAACAAAG CAGATATGGA TGAAAGCAAA AGAGCTGTGC CAAAATCTAA GGGCCAAGCT CTTGCAGATG AATATGGAAT GAAGTTTTTC GAGACTAGTG CCAAGACTAA CTTAAACGTT GAGGAAGTTT TCTTCTCTAT TGCTAAAGAC ATTAAGCAAA GACTTGCAGA TACCGATGCA CGAGCTGAGC CGCAAACAAT CAAAATCAAC CAATCCGATC AAGGTGCGGG AACATCTCAA GCTACTCAGA AATCAGCATG TTGCGGCACA TAAAAATTGG GTCCACGACG CCTGTCAAAG GAGAGAATCT GGCTAGTGAA AGAGAAATGG TATTTGGAAA GAAAAAATGA AAAAGGAAAT CAATCTTCTT TTGCTTTTCT TCTATATGAG ATGTGTTGCT ACGTGTTCTT TTAAGATTCT CTCTTTCCCC TAATGGTATA GTGTGACTGT GAAGGACACA ATTCGTATTC CATATTTCTG GAATGTATTC TCTGACATCA GAATATGACT TATGATAATA TCAGTTTATC TCACTCACAC ACCAATGATA TTGGATTCTT TGTATACA 
Length1068
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15748187.. 15750444
Download Sequence
A.thaliana
AGI-codeAT3G53610.1
DescriptionRAB GTPase homolog 8
TAIR curator summaryGTPase AtRAB8 (atrab8)
Alias[ATRAB8][AtRab8B][AtRABE1a][RAB8][RAB GTPase homolog 8]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg333932 Putative endonuclease or glycosyl hydrolase
4.69042 Ahg472093 DNAJ heat shock N-terminal domain-containing protein
7.74597 Ahg493105 RNA-binding (RRM/RBD/RNP motifs) family protein
9.48683 Ahg915586 Disease resistance protein (TIR-NBS-LRR class)
11.225 Ahg337630 evolutionarily conserved C-terminal region 4
13.0384 Ahg480219 binding
14.0712 Ahg494596 Glutathione S-transferase family protein
19.0526 Ahg471093 shaggy-like protein kinase 41
20.445 Ahg897921 centrin2
23.3024 Ahg888342 nicotinate phosphoribosyltransferase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression