| Annotation |
|---|
| Description | jgi|Araly1|915586|Al_scaffold_0008_337 |
| Sequence |
ATGACCAATT GTGAAAAGGC TGAGGAATTA GTCTGCATCA GCTGCGTAGA CGAGGTACGG TACTCTTTCG TGAGCCACCT CTCCGAAGCT CTCCGCCAAA AAGGCATAAA TAATGTGGTC ATAGAGGTAG AAGGCGATGA TCTGCTTTCC AAGGAGTCTG AGGCAAAGAT CGAGAAAGCT AGGGTTTCTG TGATGATTTT ATCCAGAATC TGTGAGCCCA CTAGAGCATG CCACAAGTTC GAGAAGGTTC GCGAGTGCCA GAGGAACAAG AACCAGGTGG TGGTTCCAGT ATTGTACGGT GAGAGTCCAT CATTGCTCGA CTGGATTAGC GTGCTGGATT TGAAAGACTT ATCAGCAATT CACCATTCCA GAATGGAATG TAGTGACTCC ATACTTGTAG AAGAGATTGT GAGAGATGTG TACGAGAAGC TCTTTTATAA GGGACGAATT GGAATCTATT CGAAGCTGCT GGAGATTGAA AACATGGTTA ACAAGCAACC GATAGGCATC CGTTGTGTTG GAATTTGGGG TATGCCTGGC ATAGGAAAGA CAACACTTGC TAAAGCAGTC TTTGACCAAA TGTCTAGCGC CTTTGATGCT TCTTGTTTTA TCGAGGACTA TGACAAAGCT TTTCATGAGA AGGGTCTTTA TTGTTTGCTG GAGGAACAAC TTTTCAAAGA AAACCCGGGC AATGACGCAA CCATTATGAA ACTGAGCTCG CTCAGAGACA GATTGAACAG TAAGAGAGTT CTTGTTGTTC TCGATGATGT GCGCAATGCT CTGGTTGTAG AGTCTTTTCT CGAGGGGTTT GACTGGCTAG GACCCGGAAG CTTGATCATC ATAACGTCTA GAGATAAACA GGTGTTTCGC CTTTGCGGAA TCAATCAAAT ATATGAGGTC CAGGGTTTAA ATGAGAAAGA AGCTCTTCAA CTATTCTTGC TGTGCGCGTC TATGAGAGAG CAGAATCTCC ACGAGTTGTC AGTGAAAGTA GTAAATTATG CTAATGGAAA CCCGTTAGCT ATCAGTGTTT ATGGAAGAGA GCTGAAAGGT AAGAAAAAAC TCTCAGAAAT GGAAACGGCA TTCCTCAAAC TCAAGCGACG TCCTCCGTTT AAAATTTTCG ATGCATTTAA AAGCAGCTAC GACTCACTCT GTGACAACGA GAAGAACATT TTTCTGGACA TAGCTTGTTT CTTCCAGGGA GAAAATGTCA ACTACGTGAT ACAACTGCTT GAGGGTTGTG GTTTCTTTCC ACATGTTGAA ATTGATGTCC TTGTTGAGAA GTGTCTGGTG ACTATTTCAG AAAACCGAGT TTGGCTGCAT AATCTGACCC AGGATGTTGG CCGAGAAATA ATAAATGGAG AAACAGTACA GATCGAGAGG CGCAGAAGAC TGTGGGAACC TTGGAGCATC AAATATTTAT TAGAATATAA TGAGCACAAA GCCTGTGGAG AACCTAAAAC AACCTTCAAA CGTGCTCAGG GCTCTGACGA GATCGAAGGC ATGTTTCTTG ACACATCAAA CTTAAGATTT GATGTGCAGC CCTCTGCCTT TAAGAATATG TTGAACCTTA GATTGCTCAA AATTTACTGT TCCAATCCTG AAGTCCATCG TGTAATCAAT TTCCCCAAAG GCTCTCTGCA TTCTCTTCCT AATGAGCTAA GACTCCTCCA TTGGGAGAAC TATCCTCTGC AATCTTTGCC TCAAAGTTTT GATCCTAGGC ACCTTGTCGA AATCAACATG CCGTACAGTC AACTTCAAAA ACTTTGGGGT GGAACCAAGA ACCTGGAGAT GTTGAGGACG ATCAGGCTTT GCCATTCCCA GCATCTAGTT GATATCGATG ATCTCTTAAA AGCTCAAAAT CTTGAGGTAA TTGATCTCCA AGGTTGTACA AGACTGCAGA ATTTCCCAGC CGCAGGTCAA TTGCTGCGTC TACGAGTTGT AAATCTCTCA GGTTGCATAG AGATTAAAAG TGTCCTAGAG ATGCCACCAA ATATTGAGAC ACTACATCTA CAGGGAACTG GCATATTAGC ATTTCCAGTT TCCACTGTTA AGCCAAACCG CAGAGAGCTT GTGAATTTTC TAACAGAAAT TCCGGGTCTT TCAGAGGCCT TGAAACTTGA GCGTTTAACA AGTCTGCTGG AATCTAGCTC ATCTTGTCAA GATCTTGGGA AGCTTATTTG CTTGGAGTTG AAATATTGTT CTCGTTTGCA AAGTCTGCCA AACATGGCTA ATTTAGATCT TCTTAATCTT CTTGATCTCT CGGGTTGCTC AAGGCTCAAT TCTATTCAGG GTTTCCCTCG GTTTCTGAAA AAGTTATATC TTGGTGGCAC TGCAATAAAA GAAGTGCCAC AACTTCCTCA AAGTCTAGAA CTCTTGAATG CACGTGGATC TTGTTTGCGA AGTCTGCCAA ACATGGCTAA TTTAGAATTT CTCAAAGTTC TTGATCTCTC TGGTTGCTCA GAGCTCGAGA CTATTCAGGG TTTTCCTCGG AACCTGAAAG AGTTATATTT TGCTGGCACT ACGTTAAGAG AAGTGCCCGA ACTTCCTTTA AGCCTAGAGC TCTTGAATGC ACATGGTTCG GACTCGGAGA AGCTTCCTAT GCATTACACA TTCAGCAATT TTTTTGATCT ATCTCCACAA GTGGTCAACG ATTTTTTGGT AAAAGCGCTG ACTTATGTAA AACACATACC AAGAGAGTAT ACGCAGGAAC TCAACAATGC TCCGACTTTC AGCTTCAGTG CGCCCTCACA TAAAAATCAA AACGCCACAT TTGGTCTGCA AACAGGATCT TCTGTAATTA CACGACTAAA TACTTCATGG AGGAACACGC TTGTGGGATT TGGTATGCTG GTGGAAGTTG CATTTTCCGA GGACTACTGT GATGCTACAG GTTTTGGCAT AAGTTGTGTT TGCAGATGGA GCAACAAAGA AGGCCGCTCT TGTAGGATAG AAAGAAATTT TCATTGTTGG GCTCCAGCGA AAGTTGTTAC AAAATTCTTT CCTACCAATC AGCAGACAAA GTGTCTAAAT GATAGGTTCA CAGTGACAAG ATGTGGAGTC CGTGTAATAA ATGTTGCAAC TGGCAATACA AGTCTTGAGA ACATATCACC AGTTTTGTCC TTGGGTCCGG TAGAGGTTTC TGGTTATGAA GCAGTTAAAG AAGTATTGAG AGTCAGCTAT GATGATTTAC AGGAGATGGA TAAAGTTCTA TTTCTTTACA TAGCGTCTTT GTTCAATGAC GAGGATGTTG ATTTGGTGGC ACCACTTATT GCCGGTATTG ACTTGGATGT TAGCTCTGGG CTCAAGGTCT TAGCCGATGT GTCTCTCATA AGTGTATCAT CCAATGGGGA AATAGTGATG CATAGTTTGC AACGACAAAT GGGTAAAGAA ATCCTCCATG GACAATCCAT GCTGCTGTCT GATTGTGAGA GTTCCATGAC CGAGGATTTG TCTGACTTAC CAAAAAAGAA GAAGAGCAAG GCAAAGAAAG TGGTTTGCAT ACCGGCTACA GACGAGGGAG ATCTATGGAC TTGGCGAAAG TACGGTCAAA AATATATCTT AGGTTCTAAT TTTCCAAGGA GTTACTACAG GTGCACTGAC CGGTTCACGC AAGGTTGTTT AGCTACGAAA CAAGTCCAAC GTAGCGACAC CAATCCAAAC ATGTTCGCTA TTACTTACAT CTCTGAGCAT AACCATCCAC GGCCCACTAA ACGCAAGGCT CTCGCCGGCT CCACTCATTC CACTTCCTCC TCCAACTACT CAGCCAACTT TTGCCTCATC TAG |
| Length | 3783 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2006638.. 2012630 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45260.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2. |
| Alias | [ATWRKY52][RRS1][SLH1][ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52][RESISTANT TO RALSTONIA SOLANACEARUM 1][SENSITIVE TO LOW HUMIDITY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.48683 |
Ahg485747 | RAB GTPase homolog 8 |
| 16.1864 |
Ahg491382 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| 16.5227 |
Ahg488386 | U-box domain-containing protein |
| 24.4949 |
Ahg490346 | RELA/SPOT homolog 1 |
| 24.5764 |
Ahg482052 | autophagy 9 (APG9) |
| 30.6594 |
Ahg935024 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 31.4643 |
Ahg488055 | Ubiquitin-associated/translation elongation factor EF1B protein |
| 34.7707 |
Ahg474178 | Membrane trafficking VPS53 family protein |
| 35.0999 |
Ahg489029 | protein kinase family protein |
| 40.3733 |
Ahg491431 | ENTH/VHS/GAT family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|