Detail



ID : Ahg944613

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944613|scaffold_700842.1
Sequence
GTCGAGCTCT TCACGAGTTC ATGAGAAATT GTCTTCCAAT GGAATTGAAT CTGCGCAAGG GGGACAAGGT TTGGGTCGAA GATAAGGATT TGGCTTGGAT TGCTGCTGAT GTGCTCGATT CTTTTGATAA CAAGCTCCAT GTTCAAACTT CTACTGGGAA GAAGGTTTTT GTTTCCCCGG AAAAGCTATT TCGGAGGGAT CCCGATGATG AAGAGCATAA TGGAGTGGAT GATATGACCA AACTGACATA CTTGCACGAA GCTGGTGTGC TTTATAATCT ACAGAGGAGA TACGCTCTGA ATGATATATA TACATACACT GGAAGCATTC TGATCGCTGT AAATCCATTT AAAAAGCTTC CACATCTCTA CAATGGGCAC ATGATGGAGC AGTACAAGGG AGCACCATTC GGTGAGCTCA GTCCTCATGT TTTTGCAGTT TCTGATGTTG CATACAGAGC AATGATTGAC GACAGTCGAA GTCAGTCAAT ACTTGTTAGC GGTGAAAGTG GAGCTGGAAA AACTGAGACA ACCAAACTAA TCATGCAGTA TCTTACATTT GTTGGGGGAC GTGCTACTGA CGATAATAGA AGTGTTGAGC AGCAAGTCCT TGAATCAAAT CCTCTCTTGG AAGCATTTGG CAATGCAAAA ACAGTTAGAA ATGATAATTC CAGCCGTTTT GGAAAGTTTG TCGAAATCCA GTTTGACACA AATGGTAGAA TATCTGGTGC CGCAATCAGA ACCTATCTTC TGGAGAGATC ACGTGTAGTC CGGATAACAG ACCCCGAGAG GAATTATCAT TGTTTTTATC AATTGTGCGC TTCGGGGAAT GACGCTGAGA AATATAAACT AAGCAACCCT CGTCAATTTC ATTATTTAAA TCAAAGCAAG ACCTATGAAC TAGAAGGAGT CAGCAGCGCA GAAGAGTATA AGAATACAAG GAGGGCAATG GATATTGTGG GCATAAGTCA TGATGAGCAG GAAGGGATAT TCCGCACACT TGCTGCGATT CTACATCTTG GAAATGTTGA GTTTTCCTCA GGGAGAGAGC ACGACTCTTC AGTGGTAAAG GATCTGGAAT CTAGACATCA TCTGCAGATG GCTGCTGATC TTTTCAAGTG TGATGCAAAT CTTTTGCTGG CTTCTCTCTG CACACGTTCA ATTCTGACCC GTGAAGGTAT CATTATCAAA GCACTCGACC CTAATGCTGC TGTTGCTAGC CGAGATACCC TCGCGAAGAC CGTTTACGCC CATCTGTTTG ACTGGCTGGT TGATAAGATC AATAAGTCTG TTGGGCAAGA TCCAGAATCT CGTTTTCAAA TAGGAGTCCT GGACATTTAT GGCTTTGAAT GTTTTAAGAA TAACAGTTTT GAACAATTTT GCATCAACTT TGCAAATGAA AAGCTGCAGC AACATTTCAA TGAGCATGTA TTCAAGATGG AGTAGGATGA GTACAGAAAA GAAGAAATTA ATTGGAGTTA TATCGAGTTT ATTGACAACC AAGATGTCTT GGACCTTATT GAGAAGAAGC CTATTGGGGT AATTGCACTC TTGGATGAAG CTTGCATGTT TCCTAGATCA ACTCATGAGT CATTTTCAAT GAAGCTGTTT CAGAACTTTA AATTTCATCC GAGATTGGAG AAGGAAAAAT TTTCAGAGAC GGATTTTACT CTCTCTCATT ATGCTGGCAA GGTTACTTAT CAAACTGAAT CCTTTTTGGA TAAAAACCGT GATTATACTA TAGTGGAGCA TTGCAATCTG CTGTCTTCCT CCAAATGCCC TTTCGTTGCT GGACTTTTCC CCTCAGCCCC AGAGGAGTCT ACCAGATCTT CTTACAAATT TTCTTCTGTG TCTTCCAGAT TTAAGCAACA ACTTCAAGCC CTCATGGAAA CTCTCAGCAA AACAGAGCCT CACTATGTTC GGTGTGTGAA GCCAAACTCA CTCAACAGAC CTCAAAAATT TGAGAGTCTT AGTGTTTTAC ATCAACTTCG TTGTGGGGGT GTACTGGAAG CTGTTCGGAT TAGTCTAGCA GGGTATCCCA CTCGAAGGAA TTATTCAGAC TTCGTGGATC GTTTTGGTCT GCTAGCTCCA GAATTCATGG ATGAGAGCAA TGATGAGCAG GCACTAACTG AGAAAATCTT GAGTAAATCA GGTCTTGGGA ATTATCAGCT AGGAAGGACA AAAGTGTTCC TAAGAGCTGG TCAAATTGGC ATTTTGGACT CTAGGCGGAC TGAAGTGCTT GATGCTTCTG CAAGACTCAT TCAGCGAAGA CTGAGAACAT TTGTTACACA TCAGAACTTC ATCTCTGTGC GGGCTTCTGC AATTTCAATT CAGGCATATT GTAGAGGATG CCTGTCTCGA AATGCTTATG CCACCAGAAG GAATGCTGCG GCAGCGGTCT TGGTCCAAAA GCATGTACGC AGGTGGCTGT CAAGATGTGC ATTTGTAAAG CTTGTATCAG CTGGCATTGT AATGCAGTCT TGCATCCGTG GTGACTCAAC TCGTTTAAAG TTTTCACATC AGAAAGAGCA TCGAGCAGCT TCTCTAATTC AGGCTCATTG GAGAATCCAT AAGTTTCGCT CAGCATTCAG GCACCGTCAG TCATCTATTA TTGCTATTCA GTGTCGTTGG CGACAGAAGC TTGCGAATAG AGAGTTCAGA AAACTTAAAC AGGCTGCTAA TGAAGCAGGT GCTTTGCGGT TAGCTAAAAC GAAACTTGAA AAACGGTTAG AAGATCTTGA ATGGCGGTTG CAGCTTGAGA AACGATTGAG AACAAGTGGT GAGGAGGCCA AGTCAAGTGA AATATCCAAG CTTCAGAAAA CATTGGAATC CTTCAGCCTC AAACTAGACG CAGCTAGGCT GGCTACCATT AATGAGTGCA ATAAAAATGC GGTACTTGAA AAGCAACTAG ACATATCCAT GAAGGAGAAG TCTGCTGTTG AAAGAGAGCT TAATGGAATG GTTGAACTAA AAACAGATAA CGCCTTGTTG AAGAATTCGA TGAACTCCTT GGAAAAGAAG AATCTGGTTC TGGAGAAGGA GCTTCTCAAT GCTAAAACCG ATTGCAATAA CACACTACAG AAGTTGAAGG AAGCTGAAAT AAGATGTTCT GAACTCCAGA CGAGTATTCA AAGTCTTGAG GAGAAACTCT CTCATCTGGA AAACGAGAAC CATGTCTTGA GGCAAAAGAC GCTAATCACA TCCCCAGAGA GAATAGGACA GGTACTTGGT GAAAAACACG CTAGTGCTGT TGTACCAGCC CAAAATGACA GGAGATCTGT ATTTGAGACA CCAACACCTT CAAAGCACAT CATGCCATTT TCACATAGCC TGTCAGAGTC ACGTAGATCC AAATTCACTG CAGAAAGAAA CCGGGAGAAC TACGAATTGC TCTCCAGGTG TATAAAGGAA AATTTGGGAT TCAATGATGA TAAGCCACTG GCTGCTTGTG TAATATACAA ATGTCTTCTG CAGTGGCATG CCTTTGAATC TGAGAGCACA GCCATATTTA ACATCATTAT TGAGGGAATC AATGAAGCCC TGAAGGGCGG AGATGAAAAC GGTGTATTAC CATATTGGCT CTCAAACGCT TCAGCACTTC TATGCCTCTT GCAGAGAAAT CTGCGGTCAA ATAGTTTTCT AAATGCTAGT GCTCAGCGTT CTGGGAGGGC TGCATATGGA GTAAGGTCTC CTTTTAAACT TCATGGACCT GACGATGGTG CTTCGCATAT AGAAGCTAGA TATCCAGCAT TATTATTTAA ACAGCAGCTG ACAGCATGTG TGGAGAAGAT TTATGGTTTA ATTCGTGATA ATTTGAAAAA GGAATTATCA CCGCTTCTGG GATCATGCAT TCAGGCACCC AAAGCTTCAC GAGGGATTGC TGGAAAATCT AGATCACCAG GTGGTGTGCC GCAGCAATCA CCGAGTAGTC AATGGGAAAG TATACTCAAA TTCTTGGATT CTCTTATGTC CCGCCTACGC GAAAATCATG TACCCTCGTT CTTCATTCGC AAACTTGTGA CTCAGGTTTT CTCATTTATC AACCTATCAC TTTTCAACAG TCTGCTTCTT CGTCGTGAAT GTTGCACATT TTCAAATGGG GAATATGTGA AATCTGGGAT TTCAGAATTG GAGAAGTGGA TAGCCAATGC GACGGAGGAG TTTGCAGGAA CATCTTGGCA CGAGTTAAAT TACATTAGAC AAGCTGTTGG ATTTTTGGTT ATACACCAGA AAAGAAAGAA ATCATTGGAT GAAATCAGGC AGGATCTATG CCCGGTATTG ACAATAAGGC AAATATATCG AATAAGTACG ATGTACTGGG ATGATAAATA TGGAACTCAA AGTGTCTCAA ATGAGGTGGT TTCTCAAATG AGGGTACTTT TGGACAAGGA TAACCAAAAA CTAACATCAA ATTCGTTCTT GCTGGATGAT GATATGAGCA TTCCTTTCTC CGCAGAAGAT ATAGACAAGG CTATTCCAGT ATTAGACCCA TCAGAAATAG AACCACCAAA ATTCGTATCA GAATATACTT GTGCACAGTC CCTTGTGAAG AAACCTTCCA CAGCTTCAAC CTCAAAGCAG ATCATTTGAT GCATATGAGC TTGATTATGC 
Length4610
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3148976.. 3161726
Download Sequence
A.thaliana
AGI-codeAT4G33200.1
Descriptionmyosin, putative
TAIR curator summarymember of Myosin-like proteins
Alias[ATXI-I][XI-15][XI-I][MYOSIN XI I][MYOSIN XI-15]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg490321 F-box family protein
3.31662 Ahg495190 Protein of unknown function (DUF3414)
4.89898 Ahg950867 U5 small nuclear ribonucleoprotein helicase
6.63325 Ahg938459 mitogen-activated protein kinase phosphatase 1
9.38083 Ahg940406 conserved peptide upstream open reading frame 41
9.69536 Ahg487627
10.9087 Ahg488313 Protein kinase superfamily protein
11.6619 Ahg946668 importin alpha isoform 2
13.2288 Ahg942029 Protein of unknown function (DUF1162)
14.1421 Ahg471949 Transcription initiation factor TFIID subunit A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression