Detail



ID : Ahg485956

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485956|fgenesh2_kg.5__1948__AT3G55330.1
Sequence
ACTGAGAAAG AAGCGAATCC ATAAGAGACG ACAACAAAAG ATCTCTCTAT ACCACATATT ACACTTTTCT CCAATGGCTT CTCTGAAGCT TTCACCTTCT TCTCCAATCT CCATCTCTAA GGTTGGTGTT CCTTGCTCTA AGAAAGGACT TTCATTTCTT GTAAAAGCTG AGCACCATTC TTCGTCTTCC TCTTCTCATC TTCAAGATAA ATGTCAGAGA CGTCTGATTG TAACATTTGG TGTTGTTGCT CCTTGGATCT CATTGCTTAG TAGAGCTCCA CTATCATTTG CTGCAGAAAG CAAAAAAGGA TTTCTTGCTG TCTCTGACAA TAAAGATGCA TATTCGTTTC TCTATCCATT TGGTTGGCAG GAAGTTGTGA TTGAGGGTCA AGACAAGGTA TACAAAGATG TGATTGAGCC TTTAGAAAGC GTTAGTGTCA ATTTGATCCC AACTAGCAAA CAGACTATTA AAGAATTTGG CCCTCCCAAG CAGATAGCTG AAACACTGAT AAAGAAAGTT TTGGCACCTC CAAATCAGAA AACAACCCTT ATTGATGCAT CAGAGCATGA TGTCGATGGG AAGACTTATT ACCAGTTTGA GTTCACTGTT CAGGCTAGAA ACTACACCCG CCATGCTCTG GGTACAATCA CGGTTTTCAA CGGAAAATTC TACACACTGA CGACGGGAGC GAATGAGAGG AGGTGGGAGA AGATGAAAGA TAGGCTTCAC ACTGTGGTAG ATTCCTTCAA GATCACTGTT TGAAAATAAT CAAGTTTGGT TTGGTTATCT CTTGTTTTGA AAAAGGCCAT TTTCTTGTAT TTTTGTCCAT TCTTCTTCTC TCTTTCCCTT AACAATATTC TTTTCCTGTA AGAGAGATTC ACTTACCTCT CTCTCTCTGC TTTTTAACCT AACTTCATCT T 
Length921
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16458190.. 16459673
Download Sequence
A.thaliana
AGI-codeAT3G55330.1
DescriptionPsbP-like protein 1
TAIR curator summary
Alias[PPL1][PsbP-like protein 1]
Gene coexpression
MR
MR Locus Description
12.1655 Ahg473970 Ribosomal L18p/L5e family protein
12.8062 Ahg897156 thylakoid lumenal P17.1 protein
13.4164 Ahg479886 Nucleic acid-binding proteins superfamily
15.0997 Ahg480047 Rhodanese/Cell cycle control phosphatase superfamily protein
17.4642 Ahg488494 thioredoxin F2
23.4947 Ahg944801 monogalactosyl diacylglycerol synthase 1
23.622 Ahg482332 Ribosomal protein S5 family protein
24.1868 Ahg477281 ribosomal protein S17
24.8193 Ahg472316 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
25.923 Ahg477291 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression