Detail



ID : Ahg486064

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486064|fgenesh2_kg.5__2056__AT3G56240.1
Sequence
CGAATCTTTG CTTTTCCGTT ACTATAAATA CTTAAGAAGA CACCATTTCT TCTCATTCAA CAAACAGACA TCTCATTCCC TTATTCAGAT CATCGGTCTC AAAGCTTAGT CGTTTCCTTT CTTCTTATAT ATTATAGCCA TGGCTCAGAC CGTTGTCCTC AAAGTTGGTA TGTCATGCCA AGGCTGCGTT GGTGCCGTCA ATAGAGTCCT AGGCAAAATG GAAGGGGTTG AGTCATTTGA CATTGATATC AAGGAGCAAA AGGTGACAGT GAAAGGTAAT GTTGAGCCTG AAGCAGTTTT CCAAACAGTT TCAAAGACTG GAAAGAAGAC TTCTTACTGG CCAGTGGATG CTGAGACTGA GCCAAAAGCC GAGGCTGAGC CTAAGGCCGA GGCCGTGACT GAGACTAAAA CCGAGGCTGA GACTAAGACT GAGGCTAAGG TTGATGCAAA AGCGGATGTT GAACCAAAAG CCGCAGAAGC CGAGACTAAG CCATCACAAG TTTAAGTATA CTAAAGATGA GAAGGAAGGC TAATCTACCT TTACAATGCT TCTTTATCTT TTGCTTGTGT GTGTTGTTGT AAGCAATGCT TTCTCTAAAC ATCTAATATT TTCATGTATA CCTTTTTCAA CCTTTGATAA GAAGATGTTG GACCCATGTT GGTCCGACTT TCTTTTATAA TAAATTT 
Length687
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16869773.. 16870967
Download Sequence
A.thaliana
AGI-codeAT3G56240.1
Descriptioncopper chaperone
TAIR curator summaryCCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.
Alias[CCH][copper chaperone]
Gene coexpression
MR
MR Locus Description
1 Ahg493510 Rapid alkalinization factor (RALF) family protein
3.4641 Ahg492886 phloem protein 2-A1
3.87298 Ahg490488 TRAF-like family protein
4.24264 Ahg492324 Fe superoxide dismutase 1
4.47214 Ahg929332 metallothionein 3
5 Ahg926057
5.91608 Ahg895882 TRAF-like family protein
6.48074 Ahg480557 ubiquitin-conjugating enzyme 29
6.7082 Ahg474913
7.4162 Ahg472513 sucrose-proton symporter 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression