| Annotation |
|---|
| Description | jgi|Araly1|486125|fgenesh2_kg.5__2117__AT3G56860.3 |
| Sequence |
GGGAAAAATC AGCTTTTTGG AGAAGAAACC AAAGAAATAA ACATTCGAAA CCCTAAAACT CCCATTAGAA TTCGACAATG ACAAAGAAGA GAAAGCTCGA AGGAGAATCT AACGAAGCGG AAGAACCGTC GCAGAAGCTG AAGCAGACGC CGGAGGAGGA GCAGCAGCAG CTCGTTATTA AAACTCAAGC AGACGTCGAA GAAGTTGAAT ACGAGGAAGT AGAGGAAGAG CAAGAAGAAG AAGTAGAAGA TGATGACGAA GACGACGATG ACGATGGCGA TGATAATCAG ACGGCTGCTA ATCGTATTGA GGCGGCGGCG ACGTCTGGAT CTGGGAATCA AGGGGATGTA AATGATGATG ATGACGATGA GCCAATTCAG GATCTGTTGG AACCGTTTTC AAAGGAACAA CTTTTGAGTC TTCTTAAAGA AGCAGCGGAG AAGCATCTTG ATGTAGCCAA TCGAATCCGG GAAGTAGCTG ATGAGGACCC TGTTCACCGG AAGATCTTCG TGCACGGTCT TGGTTGGGAT ACCAAAACAG AGACGCTTAT CGAAGCTTTT AAGCAGTACG GAGAGATCGA AGATTGCAAG GCTGTGTTTG ATAAGATCTC AGGGAAATCT AAAGGTTATG GCTTTATTTT GTTCAAGTCT CGGTCAGGTG CTCGCAATGC ACTTAAGCAG CCTCAGAAGA AGATTGGTAG TCGTATGACG GCATGTCAAT TGGCTTCTAA AGGACCTGTC TTTGGTGGAG CTCCTATCGC TGCTGCAGCT GTCTCAGCGC CTGCTCAGCA TTCGAACTCT GAGCACACGC AGAAAAAGAT TTATGTTAGT AATGTTGGAG CAGAGCTTGA TCCACAGAAG TTACTTGGGT TCTTCTCAAA GTTTGGAGAG ATTGAAGAAG GTCCTTTGGG TCTTGATAAG TTTACTGGGA GACCTAAAGG TTTCTGTCTC TTTGTTTATA AGTCGGCTGA AAGCGCCAAG AGGGCTTTGG AGGAGCCACA CAAGACTTTT GAAGGTCATA TCTTGCATTG CCAGAAAGCT ATCGATGGTC CCAAACCGGG CAAGCAGCAG CATCACCATA ACCCACACGC CCACAACAAT CCTCGTTACC AAAGGAATGA TAACAATGGT TATGGTCCGC CTGGAGGTCA TGGACATCTC ATGGCTGGTA ACCCAGCTGG AATGGGTGGT CCAGCGACAC AGGCGATAAA CCCGGCCATT GGACAGGCCT TGACAGCTAT ACTGGCATCT CAGGGAGCTG GTTTGGCTTT TAATCCGGCG ATTGGACAGG CTTTGTTGGG TTCCTTGGGG ACAGCTACAG GCGTAAACCC GAATGGAGTT GGAATGCCAA CTGGTTATGG TACTCAAGCT ATGGCACCGG GGACAATGCC TGGGTACGGT ACACAACCTG CGTTGCAAGG TGGTTATCAG ACTCCACAAC CTGGTCAAGG CGGTACAAGC AGAGGGCAAC ATGGTGTCGG GCCATACGGT GCTCCCTACA TGGGCCACTA AATGTATCAT GTATCCACCC ACTCAGTCAA ACTTGGCGGA AGTGGTGCAA GCTTCTCAAT GACACAGCTG AAGAATGATA TGTTTTGAAG AGAGTTTCTC GACAACAGGC AGTTAAGTCT TTGGATCTCC ACAACATGCA TCCAGCTAAA AGGTAAGTTC TTTGGCTATA TACAACGTGC TTTGCAGTTG AAGGGTAAGT AATCAAAAGT GTTTGAAGTA TATCTCTCAG CACGAATCTC TTGCCTATAT ATGTTCTTGT TAATTGGTCC TATCCCCTCT TTGAAGTGTT AAAAGTTGAT TTTGGTCTAA AAAGCATGTA CCTTCAAGTC CTTGTGCACA AGGTTCAGGG ATTAACAGAA AGTCACAAGA GTATTAAGTG ATAGATTGTT CCCCTTGATG TTTTCGAGGA GTTTAGAGAG GCGTGAGTGC ATGAAGTTTG TTGGTGAATG GTGATGATTA CTTTGATGGT GGAGTCTTCT TTTGGAAAAG TGCAGCTTTA GCTGAAGTGG AAGTGGGAAG TAAGTAGTAG AGTTTTGTGT CTTTGATCTC AATTCTCAAT CTCTCAATTG TTATGTCAAG TTTCGAAAAG GCATTCAATG TTCTTTCAAA CCGATCTGTG GTTGGAAAAT AGAAACTCAA AGTATAAATA AAGGTTTCGA ATATCAATAT TGCAAAAAAT ACAATCAAGT TTGTAGATTA TTGCCCAAAA ATGGTTTAAT ATGATTGCAG AT |
| Length | 2242 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17106607.. 17109584 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G56860.3 |
| Description | UBP1-associated protein 2A |
| TAIR curator summary | encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus. |
| Alias | [UBA2A][UBP1-associated protein 2A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg472581 | |
| 6.48074 |
Ahg472652 | gamma-adaptin 1 |
| 6.48074 |
Ahg485584 | Dihydrolipoamide acetyltransferase, long form protein |
| 7.68115 |
Ahg488386 | U-box domain-containing protein |
| 7.74597 |
Ahg474140 | target of rapamycin |
| 11.5326 |
Ahg928634 | RAB geranylgeranyl transferase alpha subunit 2 |
| 15.9687 |
Ahg478382 | NAC domain containing protein 52 |
| 16 |
Ahg470965 | zinc ion binding;zinc ion binding |
| 16.4317 |
Ahg927990 | Ankyrin repeat family protein |
| 17.2337 |
Ahg331474 | Transketolase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|