Detail



ID : Ahg472581

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472581|fgenesh2_kg.1__2535__AT1G23230.1
Sequence
AAAAAAATGG ATCAATCTCA GCGAACAGTC GCTGCAACGC CTTCGTCTTC TCGATCGTAC CAATTCCACC CTGCCCGTGC TGCAATTATC GATCTTTTCA ATCTCTACTT AGGGAGAGGA AGCCGTCAAA AGCCCGATGA GTCCCTCAGA GATCCTCCGA ACAAATCACA GAAGCGTGTT CATGCTCCAA ACAGAGACTT ACCACCAAGA AACGAGCAAT TCATTTTGGA TTTTGAGCAG CTTCAAAGCC AATTCAATGA TCCAGAGCAA TTGAGGACGA TTACTGAGTC AGTTTTGATA TCTTTGGTGG TGCAATGTAG CAATCATGCG CCTCGTGCTG AGTTTCTTCT CTTTGCTTTG CGTACATTGT GTAGGATTAG TTATATCAAT TGGGATACTT TTTTACCATC CCTTCTCTCT TCGGTTTCTG CTGCTGAGGC TTCGTTAAGC CAAGGTGTTC AAGCCGCGGC AACGGCTGCT TCTTCTGCTA CTTCTTCACA GTCTTTAGTT CCTGTGTCTG CCAATCCTGT CTCTAGCTCG TCGAACTATC ATTCTACCAA TCCAACGTCA TTGTTGCCTT CAGCTCATGG TATTGGTTCT CCATCAGCTT CAGGGAATGA GCCGGGTTCT TTAACTACTT TCGCTCAGGT TAAATCGTTG GAGAATGGGC AGCAGATTGC AAGAGCAGGC CAGACTGTAA GAGAGAATGC TATGAGAAAT AGTCAACGGA TTAGAGCTGC TGCTATAAAC AGTCTGCGCC AGCTCAGTTG CAAGATTATC TTGATTGGCG TTGAATTTAG TCTCAAACCC GTTACTCATG CCGAGATTTT CCAGTACATG TTGAATTGGC TTGTTAACTG GGACAGGAGA GATCCGGGAA CTGAGGACTC TGCAGGTACG TCGTGGAGAT CTGAGAAGAC TTTAGCTGAA TGGTTGCGGA GTTGTTTGGA TGTGATCTGG CTGTTGGTAG AAGAGGGTGA ATCTCGAATT CCGTTTTATG AGTTATTGCG CAGTGGTCTA CAGTTTATAG AGAACATACC TGATGATGAA GCCTTGTTCA CTCTTATCAT GGAGATACAC CGGAGGCGAG ATGCGATGGC CATGCACATG CTCATGTTGG ACCAACATCT TCACTGTCCA ACATTTGGTA CCCATCGTAT AGTGTCCCAA GTAACTGCCA ATGTTTCAGC CGAAGCTGTG CAACACTTAC GACATTCACC AATTACATAT CCAAGTGTGC TTGGGGAACC TTTGTATGGA GAGGATCTGG CGATGTCTAT TCCAAAAGGA AGCCTCGATT GGGAGAGAGC AGTGCGTTGC ATTAGACATG CTATCCGCAC TACGCCGTCA CCGGACTGGT GGAAACGTGT TCTTGTTGTG GCCCCTTGTT ATAGACCATC TACACAACCA GGGCCTATCC CTGGTGCTGT ATTCACTTCT GACATGATTT GTGAGGCAAT CATTGACAGG ATTGTTGAGC TTCTTAAGCT GACCAACTCA GGCAATGATT GCTTTGGTAT TGATTTGGTA TCTGTTACTT TTTCCCCTCT CTATGCAGAT GCAAATTGTT GGCAAGAGTG GCTGGTTTTC TCGGATATCT TCTTCTTTCT AATTAAAAGT GGGTGTACTG ATTTTGTTGA TTTCATTGAC AAGTTGGTTT CACGTCTTAA CGGTGTTGAT AACCATATTC TTCGGACGAA TCATGTGACG TGGCTGCTTG CACAAATAAT ACGCGTGGAG CTTGTGATGA CTGCTTTGAA CTCAGATGCT AAAAAGGTGG AGACTACTAG GAAGATCTTA TCATTTCACA GGGAAGACAG AAATTCTGAT CCCAATAATC CTCAGAGTGT GTTGCTTGAC TTCGTTAGCA GTTGTCAGAA TCTACGGATT TGGTCACTAA GCACAACAAC TAGGGCATAC CTAAACAATG AACAGCTGTT GAAGGGAAAA CAGATCGATG AGTGGTGGAG AAGCAAAGGA GAGCGGATGA TGGATTATAT GAATATGGAT GATAGGTCGA TTGGCATGTT TTGGGTTGTT TCCTACACTA TGGCACAACC AGCGTGTGAA ACAGTTATAA ATTGGCTATC TTCAGCTGGC ATGGCTGAGT TACCGGGATT ACAGCCAAAC GACCGAGTAA TGATGACGCA GGAAGTGACC CCGTTACCTA TGTCATTGCT ATCTGGCTTT TCAATGAATT TGTGCTTGAA ATTGGCCCTT CAGATGGAAG AAGCTTTGTT TGTTAGCCAG GTTGTTCCTA GCATTGCAAT GGTTGAGACA TACACAAGAT TGCTTCTGAT TTCCCCTCAT TCGATGTTCC GTTCGCATTT CAGTCAATTG GCCCAGCGAA ATGCTTCTCT GCTAAGCAAG CCTGGAGTGA CTTTGCTTGT TCTTGAGATT CTGAACTATC GGTTGCTTCC GCTCTACAGA TACCAAGGAA AGAGTAAAAC TTTAATGTAT GATGTTACTA AAATAATATC TGCATTGAAA GGAAAACGTG GTGACCACCG TATATTCAGA CTAGCTGAAA ACTTATGCAT GAATCTCATT TTATCACTCA GAGACTTTTT TTCTGTGAAA CGGGAGGGAA AAGGGCCAAC TGAATTCACT GAAACATTAA ACCGCATAAC CATCATGACT CTTGCTATCA CTATCAAAAC ACGTGGTATC GCAGACCCTG ATCACTTGGT TTATCTGCAA ACCATGTTGG AACAAATACT CGCGACGAGT CAGCATACAT GGTCAGAGAA GACGATGCGG CATTTCCCAT CCCTTCTCCG TGACACATTG AATGGACGGG TAGACAAGAG GGGCCTATCC ATTCAGGCAT GGCAACAGGC TGAAACAACT GTGATAAACC AGTGCACTCA GCTTCTCTCA CCATCTGCTG AACCCGCTTA CGTTTCAACA TACCTCAGTC ACAGTTTTCC TCAACACCGT CAGTATCTAT GTGCTGGTGC TTGTCTGCTG ATGCAAGGCC ACGCTGAAAA CATCAACAGC ACAAATCTGG CACGGGTTCT GAGAGAAGTT TCTCCTGAAG AAGTCACTGC TAACATATAC ACTTTGGTCG ATGTTTTGCT TCACCACGTT CATGTAGACC TTCAGCAAGG ACAATCTTTA GAGGCAGTTC TAGACAAGGC AGGCGCAAAT CTTGCATTTT TCTTCTGGAC ACATGAAATG CTTCCTCTCG ACATTTTTCT TCTGGCGCTC ATTGACCGTG ATGATGATCC GCACGCCTTG ATAATTGCAA TGAGCCTACT TAAAACGCCA GACCTTCTGC TGAGGATTAA AAACTACTGC CAAAACCGTG GGTCTCCTGA GCACTGGCTT GTCACACAGG TGTTCAAACG CAATGAACTC CAGAAGGCCC TTGGTAACCA TCTTTCTTGG AAGGACAGGT ATCCAACGTT CTTTGATGAT ATTGCAGCGC GTTTGCTTCC AGTTATCCCT CTAGTGGTTT ACAGGCTCAT CGAGAACAAT GCGATGGACC AAGCTGATAA TCTTTTGCTT GCACACTCGC ATTTTCTAGC TTATCATCCT CTCAGATTCA CGTTTGTCCG AGATATACTC GCCTATTTCT ATGGTCATCT TCCTGGGAAA CTTGTTCTGC GCATGCTCAA AGTACTTGAT CTCAGCAAGA TTCCATTCTC TGAATCATTC CCGCAGTACA TTAGCCCTGC CGGTGCCGCT GTATGCCCAC CTCTAGATTA CTTTGCCTCT CTTCTGCTTA ATCTTGTAAA CAACGTTATA CCTCCACTTA GCAGCAGCAG CAACTGCAGC TCGAGGTCTG GCTCAATGGC AGACATCTTA AACAGCTCAG CAAGACCTCC TCATGGAAAA ACTCCAGGAA CATCTCAGCC TGGACCAGCA AACGCCTCTG AGGGCCAGAA AGCATTCTAC CAGATCCAAG ACCCAGGAAC TTACACTCAA TTGGTTCTTG AGACAGCCGT GATCGAGATC CTCTCGCTTC CCGTCTCCGC TGCTCAGATT GTCTCTTCGC TTGTCCAGAT AATTGTCAAC ATACAATCGA CTCTGATTCA ATCTGGAAAC GGGTTCCACG GCGCTGCGAA CGGGGTGGGG CAAGGGTCGG TACTGCCAAC GTCTCCCTCA GGAGGGAGCA CGGACTCCAT GAGCGCTAGC CGGTCCACTT GTCTGATTCC TGGTATCAAC ACGGCGAGCT TTGTCTCTAG AAGTGGTTAT ACATGTCAGC AACTGTCGTG TCTTTTGATT CAAGCTTGTG GGCTTCTGCT GGCCCAGCTC CCTCCAGATT TTCACATGCA GCTTTACTTG GAGGCAACAC GTGTGACAAG GGAAACATGG TGGCTTAAGG ACGGGAAGAG ATCACAAGGT GAACTAGACT CGGCTGTTGG ATACGCTTTG ATGGATCCGA CATGGGCTGC TCAGGACAAC ACCTCGACCG CAATAGGAAA TATAGTCGCC TTGCTTCATG CTTTCTTCAG CAATCTCCCA CAAGAATGGC TTGATGGCAC GAATGCCATC ATCAAGAACC TCCGGCCTGT GACATCTGTC GCAATGCTCA GAGTTGTATT CCGTATTATG GGGCCACTGC TTCCGAGGCT TGCCAGCACA CATACTCTCT TTAACAAGAC GTTAACCCTT CTCTTATCCG CGCTGGTCGA TGTTTTCGGA AAGAACGCAC AGACAACAGC CCCTGTTGAA GCATCCCAGA TTACAGATCT TATTGATTTC CTACACCATA TTATTCACTA CGAGGGACAA GGAGGAGCTG TCCAAACTAG CAGCAAGCCG AGACCCGACA TCTTGGCGTT AATCGGAAGA GCAGCAGATT CTCTCCGACC AGATGTACAA CACCTTCTCG CTCACCTCAA AACCAACCCG AATTCTTCGA TATACGCAGC TGCTCATCAG CAGAATACCG CAAAGACCAA CACCTCTTAA 
Length4920
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9825093.. 9832390
Download Sequence
A.thaliana
AGI-codeAT1G23230.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg486125 UBP1-associated protein 2A
3.4641 Ahg483145 RING-H2 finger C1A
5.65685 Ahg888770 F-box family protein
6.16441 Ahg472334 U5 small nuclear ribonucleoprotein helicase, putative
6.245 Ahg490504 RNAhelicase-like 8
9.16515 Ahg488249 SWIB/MDM2 domain superfamily protein
11.3578 Ahg889422 Adenine nucleotide alpha hydrolases-like superfamily protein
12.3693 Ahg944707 ATPase, F0/V0 complex, subunit C protein
12.6491 Ahg473690 PDI-like 5-2
12.7279 Ahg941120 sister chromatid cohesion 1 protein 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression