Detail



ID : Ahg486142

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486142|fgenesh2_kg.5__2134__AT3G56990.1
Sequence
TTTTGACTTC AAATTTTGCG TTTCCTCTGC AACTCGCCGT CAAGGGTGGA AGAATTAGGG TTTCCTGTTC TATCTAACCT GCTTGTAGAT GGCGTCTTAT GGAGACAGAC TGAAGTCGAC CTCCATTAAT GGAGTTAAGT TATACCATGT TTCTTCTGCT CCCAATGTTG CGACTTGGCT TAATCCTAAG AAGCAACGAG CTCTCCGCAA AAACCCTCAT TATATGCAAA GAGTGGAGCT GATTCAGGAG TTGAAGTTTG AGACTGCCAC TACTAGAATC AAAGCGACTC CAGACGGAGA GTATCTGATT GCTTCAGGCA TATATCCACC TCAGGTCAAA GTTTATGAGC TAGGTCAGCT TGCTTTGAAG TTTGAGAGGC ATTTGGACTC GGAGATAGTT GATTTCGAGA TATTGGATGA TGACTTCTCA AAGCTTGCCT TCTTATGTGC TGATCGTTCT ATTCAACTAC ACGCCAAATA CGGGAAACAC CACACTTTAC GAATTCCAAG GATGGGGAGA GATATGACAT ATGATCCCTG GTCTTGTGAT CTTCTTTGCG CTGCTTCCTC ACCTGATCTA TACAGAATCA ATTTGGAGCA GGGAAGATTT CTCTCTCCTC TCAGCACTCA ATCCCCAGCC CTTAATGTTG TTTCTCGAAG CAACCTCCAT GGATTAGTTG CTTGTGGTGG TGAGGATGGT GCTGTGGAAT TTTTTGATAT GAGAATGAAA TCATCTGCTG CTAGAATTAA CGCGGTCACA CATGGTGGTG ATGCTGCTGC GGAGGTTACT GCTATCGAGT TTGATGACAG TGAAGGTCTT CAAGTAGCTG TCGGGAGTAG TGCGGGAAAG GTATTCATAT ACGACTTGCG TACTTCAACT CCAATAAGAG TGAAGGATCA TATGTACGAG AGCCCGATTT TGAGTATAAA GTGGCAACGA ACTCTTAATA CTCAACAACC TAAGTTGATT ACTACCGACA AACACATTGT TAGAATATGG GATCCAAACA CGGGAGAAGG TATGACCAGC ATTGAACCGA CTCAAGGAGG AATAAACGAC ATTTGTGTGT TCCGTGGAAG CGGACTTATG CTTCTTGCTT TAGACTCTAG CCTAATTCCA TCTTACTTCA TACCTGAACT CGGTCCTGCC CCCAAATGGT GTTCTCCTCT TGAAAATCTA ACGGAAGAGT TGGAGGAAAG TGGACAGACA ACTATTTATG ATAATTACAA ATTCGTGACA AAGGAAGATC TGGAGAAGTT GCAGCTAACT CATTTGATTG GAACAGATCT TTTGAAAGCA CAAATGCATG GATATTTTAT GAATCACCAT TTGTACAAAA AGGCTTTAGC AGTGGCTGAA CCTTTTGCAT ATGATGCTTA CTTAGAACGT AAGAAGCAAG AGAAGTTAGA AGCGAACCGT ACACAGAGAA TCACAAAGAA GAGAAGGTTG CCAAAGGTTA ACCGAGAACT CGCAGCAAGG CTTCATGGGG ACGATTCGGA GGAGGAGAAT AAAACTGCCG AGGATGAGGA GGCCGCCAAG AAAGTGTCGA AAAAGAAGAA ACCGATACTT AGTGGCGAGA ATTTCGCAGA TGGTCGGTTT AGTTCGATGT TCCAAAATCC GGACTACCAA ATTGATCCAG AATCATATGA ATATGGTGTC CTACACCCTG TTGCTTCTTC GAAGAAGCAA CCTTCTTTGT TAGATGAACA CTTTGAAGCT GTATCGGATG ATGATGAGAA CAGTGATTCT GATGCATCAC TGGCTTCAGA TGACGAGGCC GACGATGGAG ACGCAACTAG GCCAAGCAAG AAAGCAAGAA TTCCGAAGTT GTTTGAAGTG AAAGATGAGC GCCATGCCGC AGCTTTTTAC AACCGCACTT CACTGGCTAA AGAAGATAGT CTTCCTATGG GCGAGCGTGT CAAGGCTATA GAGAACCGGC GTGGCAACTT TGGAGGCTCG AAAGATATCA AATTCGGTCC TGGAGGGTCT CGGGAGATTT CCTTCAAGGC GAGAAGCTCA TCGAAATACA AAGAAGACAG AGGAGATAGA GACGATGAGG ATGAAGATGG GCAAAGAAAC AGGAGGAGAG GAGTTCAGTC TCTTGGACTG AAATCAGATA ATGTTAGAGG CGGTTTTAGA GGGAGAGGAG GCGGCGGTTT TAGAGGGAGA GGAGGCGGCG GTTCCCGGGG AAGAGGAGGT GGTGGTGGTT CCCGGGGAAG AGGTGGCCGT GGTGGTGGTC GTGGAAGAGG CCGGCGATGA TAAATGTATC TTTCACTTTC AGGGGTTTAA TTAGTTTTGG AAAATGTGTC ACCTACTTTT GAGAATTCAC ATATACAATT TTGGAAT 
Length2347
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17187994.. 17194321
Download Sequence
A.thaliana
AGI-codeAT3G56990.1
Descriptionembryo sac development arrest 7
TAIR curator summary
Alias[EDA7][embryo sac development arrest 7]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg895753 HSP20-like chaperones superfamily protein
4.12311 Ahg929163 DNA binding;DNA-directed RNA polymerases
4.69042 Ahg489645 Protein prenylyltransferase superfamily protein
5.2915 Ahg477332 P-loop containing nucleoside triphosphate hydrolases superfamily protein
6.48074 Ahg490266 GTP binding Elongation factor Tu family protein
7.54983 Ahg489049 replication factor C1
8.06226 Ahg490940 Tetratricopeptide repeat (TPR)-like superfamily protein
8.3666 Ahg944778 Mitochondrial glycoprotein family protein
10.9545 Ahg949010 exoribonuclease 2
12.4499 Ahg495090 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression