| Annotation |
|---|
| Description | jgi|Araly1|489049|fgenesh2_kg.6__2183__AT5G22010.1 |
| Sequence |
GCGACCGTTT CTTCTTCTTC TTCGTCGCCT AATTCTCGCT TGTAGCCGGA AAAGTCCCCG GAGGAGAATC AAGGCAGCAT TGTGTGCTCT TTCGTTTGTA GTCGAATCCT CGAGACGGGC AAATGTCGGA TATTAGGAAG TGGTTTATGA AAGCTCATGA AAAAGGGAAT GCAAGTGCTC CGAAATCGAC GTCTTCCAAG GCAGGTCCTG CGAAGAATGC TGCAGAGACT GCACCAATAA AATCAGAGCA GGCTAGTGAA GACCTGGAAA CTGCTGCTAG AAGAAAAACG AGCAAGTATT TTGGTAAAGA TAAAACAAAA GTTAAAGATG AGAAAGAGGT GGAAGAAATT CCTGCCAAGA GGAAACTTAA GACTGACTCT GATGATTTAG CCAAGCCTCG TCCAAGAAAG GTTACCAAGG TTGTTGATGA TGATGATGAT GATGATTTTG ATGTACCTAT TTCAAGGAAG ACACGTGATA GCACTCCCAG CAAAAAACTA AAATCTGGGT CAGGTCGAGG AATCGCAAGT AAAACTGTTG ATAACGACGA GGATGATGAT GGTGAAGATG CTCAAGATAA GGAGACTCCT CTAAAGGCTG CTGGAAGAGG CCGTGGCGGT AGAGCTGCTC CAGGGGCCTC AACTGGTGGA AGAGGTAGAG GTGGAGGGCG AGGTGGGTTT ATGAATTTTG GTGAAAGGAA AGACCCACCG CATAAAGGAG AAAAGGAAGT TCCTGAAGGC ACCCCTGATT GCTTAGCTGG ATTGACATTT GTAATTAGTG GAACACTTGA TAGTTTAGAA AGAGAAGAAG CAGAAGATCT GATTAAGCGG CATGGTGGTC GTATTACAGG CTCTGTTAGC AAGAAAACGA CTTATCTTTT GTGTGATGAA GACATCGGCG GAAGGAAATC TGAAAAAGCT AAAGAACTGG GCACTAAGTT TCTTACAGAG GATGGCCTAT TTGACATGAT CCGGTCCTCT AAACCTGTAA AAAAATCTCT ACCTGAAAGG ACAAACAAAG GCACTGAAAA AATCTGTGCA CCGCCGAAGA CAAGTCCTCA GAAAGAAGAG ACAAGAGGAA AACCTTTAGC AAAAAGTTCG CCCAACAAGG TTCCCCCGGC GAAAGGAAAA AAGAAAATTA TTGAGACTTC CTTGCCATGG ACAGAAAAAT ACAGACCGAA GGTTCCAAAT GAGATTGTTG GGAATCAGTC ATTGGTTACT CAGCTTCACA ACTGGCTGTC CCACTGGCAT GATCAATTTG GAGGTACGGG AAGTAAAGGA AAGGGGAAGA AATTGAATGA TGCTGGTGCG AAGAAGGCTG TACTTTTGAG CGGAACACCT GGTATTGGAA AAACAACATC AGCAAAGTTG GTTAGTCAGA TGCTTGGTTT CCAGGCAGTT GAGGTTAATG CTAGTGACAG TCGTGGAAAG GCGAACTCGA ATATTGCCAA GGGAATTGGT GGCAGCAATG CAAATACTGT AAAAGAACTT GTCAATAACG AAGCCATGGC TGCCAACTTG GATAGGTCAA AGCCCCCAAA GACTGTTCTA ATCATGGATG AAGTAGATGG AATGTCTGCA GGCGACAGGG GAGGTGTTGC AGATCTTATT GCTAGCATTA AAATATCAAA GATTCCTATC ATCTGCATTT GTAATGACCG ATACAGTCAG AAACTGAAGA GTTTAGTAAA CTACTGTCTT CCCCTCAATT ACCGGAAGCC CACGAAACAG CAGATGGCAA AAAGGCTGAT GCATATTGCT AAGGCAGAAG GCCTTGAAAT TAATGAAATT GCCCTGGAAG AACTCGCTGA GAGAGTGAAT GGTGACATAC GATTGGCCCT TAATCAGCTC CAATATATGA GCCTGTCCAT GTCAGTCATC AAGTACGATG ATATCAGGCA GCGCCTGCTA AGCAGTGCGA AGGATGAAGA TATATCCCCT TTCACAGCTG TTGACAAGTT GTTTGGTTAT AATGGTGGGA AGCTGAGAAT GGATGAACGG ATTGACCTAA GCATGAGTGA TCCGGATTTG GTTCCCCTAC TTATACAGGA AAACTATCTC AATTATAGGC CAAGCGGTAA AGATGAGGCA AAACGCATGG ATTTACTTGC TCGTGCTGCT GAATCTATTG CGGATGGTGA TATTATCAAT GTGCAGATTC GAAGATACAG ACAATGGCAA CTCTCTCAAT CTTGCTGTGT TGCATCTTCT ATTCTCCCAG CTTCATTGTT GCATGGATCA AGGGAGGTAC TCGAGCAGGG AGAGCGTAAT TTCAATAGAT TTGGTGGGTG GCTTGGCAAG AATTCTACTG CGGGAAAAAA TAGACGGTTA ATGGAGGATC TGCATGTTCA TGTCCTTGCT TCCCGTGAAT CCAGCGCTGG AAGGGAGACA CTTCGTGTTG ATTATCTTCC CCTTCTCTTG AGCCGCTTGA CTAGCCCACT TCAGACACTT CCTAAGGATG AAGCAGTTTC AGAAGTTGTT GATTTCATGA ACTCCTACTC TATAAGCCAG GAGGACTTTG ATACTATTAT GGAGTTGGGA AAATTTAAGG GACGTGAAAA TCCGTTGGAG GGTGTTCCAC CTCCAGTTAA AGCAGCTTTG ACCAAAAAAT ATAATGAGAT GAATAAAACC AGAATGGTAC GCGTGGCGGA CATGGTGCAG CTTCCGGGAG TGAAAAAGGC GCCAAAGAAG CGAATAGCTG CAATGCTGGA ACCAACTGTT GATAGTTTGA GAGATGAAGA TGGCGAGCCG TTAGCAGATA ATGAAGAAGA AAATGGATCA GACGCTGAAG AAGACTCAGA AGAAGCAACC GATGGAGAAA AGCTGGAGTC AAATCTTAAA AATCTGAATG CTAGAGGGAT CCAAGTGGAA TTGGATTTGA AAGGAGCTGG AAGCTCAGGT TCAAGAAAGG CGGCTGGTAA AGGTAGAGGC AGAGGCAAAG CAGCTGATGC GTCTGCTGAG AAGAAAGCTA CAGGAAGAGG CTCTGGTGCC AAACGAAAGA GATGAGAAGC CAATCGCATC GGTTTTCAGG CAAAATTTTT CCGAGAAGTC TCTTTTTGCA ACGGATTTTG AGGTTGATTT TTTTTTTTTT CTTTTGGATT GGCAGATGAA TTTATGATGT TTCTGGAGTG TAAGAGCGGA TTCTAGTTTT GCTTGTGAAC TCAGAATGCC GACTAATGAT GAACACTAGT ATGGACAAAA TGAACGCAGA ATGCTAATGG |
| Length | 3220 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 8692825.. 8700240 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G22010.1 |
| Description | replication factor C1 |
| TAIR curator summary | |
| Alias | [AtRFC1][RFC1][RFC1][replication factor C1][replication factor C 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg476418 | Mitochondrial substrate carrier family protein |
| 7.54983 |
Ahg486142 | embryo sac development arrest 7 |
| 10.7238 |
Ahg488925 | nucleoporin-related |
| 11.4891 |
Ahg477786 | ARM repeat superfamily protein |
| 11.9583 |
Ahg892895 | Splicing factor, CC1-like |
| 14.4222 |
Ahg319845 | nucleic acid binding;zinc ion binding;DNA binding |
| 16.4317 |
Ahg930656 | FK506-binding protein 15 kD-1 |
| 18.1659 |
Ahg889766 | auxin response factor 9 |
| 18.7083 |
Ahg478482 | DnaJ domain ;Myb-like DNA-binding domain |
| 20.8327 |
Ahg337635 | Nuclear pore complex protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|