| Annotation |
|---|
| Description | jgi|Araly1|949010|scaffold_800897.1 |
| Sequence |
TTCTTCACGA AAATTCTCCG ATGGGAGTTC CGTCGTTCTA CAGATGGTTA ATCCAGAGGT ATCCATTGAT TATACAACAA GTCATTGAAG AAGAACCACT CGAAGTTAAT GGCGGCGTCA CGATTCCAAT CGATACAAGT AAACCTAATC CTAATGGTTA CGAGTATGAT AATCTCTATC TCGACATGAA CGGAATCATT CATCCTTGTT TCCATCCTGA AGATAAACCT TCTCCTACTA CGTTTACGGA GGTGTTTCAA TGTATGTTCG ATTACATTGA TAGGCTTTTT GTTATGGTTC GACCTCGGAA GCTCTTATTC ATGGCTATTG ATGGTGTTGC TCCAAGAGCT AAAATGAATC AACAGAGAGC TAGACGATTT AGAGTTGCAA AAGATGCAGC TGAAGCAGCA GCTGAAGAAG AGCAGCTGCG GGAAGAGTTT GAGAGAGAAG GGAAGAAATT GCCTCCTAAA GTAGATTCTC AAGTTTTTGA CTCTAATGTT ATAACTCCTG GAACAGAGTT CATGGCTACT CTGTCGTTTG CGTTGCGATA CTACATTCAC GTTAGACTAA ATTCTGATCC TGGGTGGAAA AATATTAAGG TTATACTTTC GGATGCTAAT GTTCCTGGTG AGGGGGAACA CAAGATCATG TCGTACATAC GTTGTAATAA GAACCATCCT GGTTATAACC CAAACACTCA TCATTGCCTA TATGGTTTGG ACGCCGATTT GATCATGCTG TCTTTGGCCA CCCACGAAAT TCATTTTTCA ATCCTTCGTG AGGTTGTTTT CTTTCCTGGA GAGAAAGACA AATGCTTCTT GTGTGGTCAA GTTGGGCACC GAGCAGCAGA TTGTGAGGGA AAGATAAAGA GGAAGGCAGG AGAAATGCTT GATGATACTG AGGCAGATGT TGTGGTGAAG AAGCCATACG AGTTTGTCAA TATATGGATA CTTCGAGAGT ATTTGGAACA CGACATGCAG ATTCCTAACC AGCGATCGAA AAAAAATTTG GACCGCTTAA TTGATGACTT CATCTTCATT TGTTTTTTCG TTGGGAATGA TTTCCTGCCA CATATGCCTA CGCTAGAGAT ACGGGAGGGT GCTATAGAAC TGCTGATGTC TGTGTACAAG AATAAATTTA GATCAGCAAA AAAATACTTG ACCGATTCAA GCAAGCTGAA CTTAAGAAAT GTGGAGCGTT TCATCAAGGC CGTTGGGACC TATGAAAATC AGATATTTCA GAAGAGAGCA CAAGTACAAA AGAGGCAATC AGGAAGGTTT ATTCGTGACA AAGCTCGTGA AAAAGCTCGT GACAGTGTTC AAGCAAGCAG AAAATTCTCT GGCAAGTTGG TGCAATTAGA TTCTCTAGAT GAAGTGTCTG ATTCATTGCA TTCCTCACCT CCACGAAAAC ATTTGCGTTT GTCTTTGGAT AATAACATTG GTGTGGCGAA TGTTGAAACA GAAAATAGCT TCAAAGCTGA AGTAAGTCAT CTTGTATCTC GTCTGAGGAA TTTTAACAAA TTTGTAGCTT GTCTCCCGTT TTTTTTTGAA CTGCAGTTCT TTTGTTTTGG AGCTTTTCTC TCTCATTTAA ACTGTGCTAA AGTACATAGT GGTTTTCAGG AACTAGATAA CGGAGAAGAC TTAAAGTTTA AGCTTAAGAA ACTGCTGCGG GATAAATCTG ATGTGTTAAG CTCAGGAAAG GGAGAACAAG ATAAGGTTAA GCTAGGTGCA ACAGGATGGA GGGAAAGATA CTATGAAGAG AAATTCACAG CTAAGTCTGC CGAGGAAATG GAACTAATAC GCAGAGATGT TGTTTTGAAG TATACCGAAG GTCTTTGTTG GATAATGCAT TATTATTATC ATGGTGTTTG TTCCTGGAAC TGGTTTTATC CATATCATTA CGCACCTTTC GCATCAGATC TCAAGGGCCT TGATAGCCTA GATATTAAGT TTGAACTAGG TTCCCCGTTT AAACCTTTCA ATCAACTTCT GGCTGTTCTT CCATCTGCAA GTGCACATGC TCTCCCGGAG TGCTATAGGA CATTGATGAC AGATCCAGCT TCGCCTATAG CTGATTTTTA TGCTGCTGAT TTTGAGATTG ACATGAATGG AAAACGCTAC TCTTGGCAGG GTATATCGAA ACTGCCTTTT GTTGACGAAA GGCGTCTTCT GGAGGCAGCT GCACTAGTGG AGAAATCACT GACGAACGAA GAAATTCGAA GAAACAGTGT GTTGTTTGAC ATGCTGTTTG TTGTTGCATC TCATCCCCTT GCTGAACTCA TCCGTTCTCT TAATAGCCGT ACCAACAACT TGAGCAATGA AGAACGAGCA ACTATCATCG AGAAAATTGA CCCTGGACTA AGTGATGGGA TGAATGGTTA CATAGCTTCA TGTGGTGGAG ATAGTCAGCC TCCATGTTTC AGCTCCCCAG TCGAGGGCAT GGAAGATGTT TTAGCCAATC ATGTCATTTG TGCCATATAC AAACTTCCAG ATGATATCAG AGGCAGCGAG ATTACTCATC AAATTCCAAC ATTGAAAATC CCTAAACAGA CTATACATCT AGTGGATTTG AAAGCTGAAG GTCTTCTCTG GCATGAAGAT GGTGACAGAA GACGAGCTCC TGCAAAAGTT AAAAAAATCA AGAGGTATAA TCCCGAAGGA TCTATTTCTG GGAATAGGCT TGGGAAGGCA GCACACAGGC TTGTGTTGCA AACAATAAAT GCCCAACCTG ATAGTACGCA CATCAACTCG GAACCAGCGT TGTGTCCAAA TACTGTTTTC CAGAACCAAC GAGTGCCGAA AAGAATCCCA GCATTTCGAG AAAATGGGAT ACAATGGATA AGCCCTCCGA CTCAAATCAC TCCGAAGAAG ATGAAAAGCC CTGAAAGTCA AAAGACTAGG AAGAAGAATG ATACCCCTCA GAGTCGAGAC AAATCGAAGA AGCTGAAAAG CTCTCTGAAA GTAATCCCTT TGAAGATGAA GAAAACTAAA AACCCTCAGA GAGATTTCAC TCGGGGGAAG AAGAAGGAAA ACATAACCCC TCAAAGGAAA CCCACTAAGG CGGAGAGGCA GGCGAAACAC ATTCGCATGA TGGAAGAGGC GAAAAGGATA AAAGAGAGGA AAAAAGAGAA GTATTTAAGA AAGAAAGCCA AATATGCACA AAAGGATCCC AACACAGCTT GAGCTTCATC GTGAACTCTT ACT |
| Length | 3203 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 5849525.. 5856442 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42540.2 |
| Description | exoribonuclease 2 |
| TAIR curator summary | Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing. |
| Alias | [AtXRN2][XRN2][EXORIBONUCLEASE 2][exoribonuclease 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg328571 | SDA1 family protein |
| 2 |
Ahg482439 | RNA polymerase I specific transcription initiation factor RRN3 protein |
| 3 |
Ahg487826 | |
| 3.60555 |
Ahg471723 | CASC3/Barentsz eIF4AIII binding |
| 5.47723 |
Ahg913002 | DEA(D/H)-box RNA helicase family protein |
| 10.9545 |
Ahg486142 | embryo sac development arrest 7 |
| 12.8062 |
Ahg495090 | Galactose oxidase/kelch repeat superfamily protein |
| 14.9666 |
Ahg490654 | FMN-linked oxidoreductases superfamily protein |
| 18.4391 |
Ahg936653 | Protein of unknown function (DUF185) |
| 18.6548 |
Ahg480636 | ribonuclease II family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|