Detail



ID : Ahg486166

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486166|fgenesh2_kg.5__2158__AT3G57230.1
Sequence
ATGGGAAGGG GAAAGATCGC GATTAAGAGG ATCAATAACT CTACGAGCCG TCAGGTTACG TTCTCTAAGC GAAGGAATGG ACTGTTGAAG AAAGCTAAGG AGCTTGCGAT TCTCTGCGAT GCTGAGGTTG GTGTTATCAT CTTCTCCAGC ACCGGTAGGC TCTACGATTT CTCCAGCTCC AGCATGAAAT CGGTCATAGA GAGATACAGC GATGCCAAAG GGGAAACCAG TTCAGAAAAT GATCCCGCTT CAGAAATTCA GTTCTGGCAA AAGGAGGCTG CGATTCTAAA GCGACAGCTA CATAACTTGC AAGAAAACCA CCGGCAAATG ATGGGGGAGG AGCTCTCTGG ACTAAGTGTA GGAGCTTTAC AGAATTTGGA AAATCAGCTT GAATTGAGCC TTCGTGGCGT TCGAATGAAA AAGGATCAAA TGTTAATCGA AGAAATACAA GTACTCAACC GAGAGGGGAA TCTCGTGCAC CAAGAGAATT TAGACCTCCA CAAGAAAGTA AACCTAATGC ACCAACAGAA CAAGGAACTA CATGAAAAGG TTTCAGAGGT TGAGGGTGTG AAAATCACAA ACAAGAATTC TCTTCTCACA AATGGTCTAG ACATGAGAGA TAACTCGAGC GAACATGTCC ATCTTCAGCT CAGCCAACCG CAGCATGATG AGACGCATGC AAAAGCTATC CAACTCAACT ATTTTTCTTT CATTGCATGA TGATATATTC GGTGTGCCGA CACACTTATG TTGACCTCAT CGGAATCATA TCTCAATTAA CTGTATCAGT TTGCAATCCC TTTCTATCAA GCACCAGCTT TG 
Length822
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17299797.. 17303113
Download Sequence
A.thaliana
AGI-codeAT3G57230.1
DescriptionAGAMOUS-like 16
TAIR curator summaryMADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.
Alias[AGL16][AGAMOUS-like 16]
Gene coexpression
MR
MR Locus Description
14.6969 Ahg909961
16.8523 Ahg350042 glucuronidase 2
18.2757 Ahg476122 serine/threonine protein phosphatase 2A
19.4422 Ahg482340 Nucleic acid-binding, OB-fold-like protein
20.5426 Ahg478095 CONSTANS-like 9
26.2679 Ahg919135 Ras-related small GTP-binding family protein
34.5688 Ahg496364 Arabidopsis thaliana protein of unknown function (DUF794)
34.9285 Ahg478085
38.8844 Ahg936826 ribosomal protein L16
41.5211 Ahg472580 Dynein light chain type 1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression