| Annotation |
|---|
| Description | jgi|Araly1|486171|fgenesh2_kg.5__2163__AT3G57290.1 |
| Sequence |
TTTTTACCTC ATCGTCTCTG AAACTCCCAT CTCTGCCGTC TAAAGAAGAT TTTGCCACTG GGAAGCGGCG GAGATTTAGA GATTTGCGAC GATGGAGGAA ATCAAAGAGA ACTATGACCT GACGCCACGA GTAGCGCCTA ACCTGGACAG ACACTTGGTG TTTCCTATAC TCGAGTTCCT TCAAGAGCGT CAGCTTTACC CTGATGAGCA GATCCTGAAG TTTAAGATCG AGCTTTTGAA CCAGACAAAC ATGGTTGATT ACGCCATGGA TATTCACAAG AGCCTCTACC ACACTGAAGA CGCTCCTCAA GATATGGTGG AGAGAAGAGC AGAGGTTGTG GCTAGGCTCA AATCTTTGGA GGAGGCTGCG GCTCCACTCG TGTCTTTTCT TTTGAACCCT AACGCTGTGC AGGAGCTAAG AGCTGACAAG CAGTACAATC TCCAGATGCT CAAGGAACGC TACCAGATTG GTCCAGACCA GATTGAGGCT CTGTACCAGT ACGCCAAGTT TCAGTTTGAA TGTGGGAACT ATACTGGTGC TGCTGATTAT CTTTACCAGT ACAGGACCCT GTGCTCCAAC CTTGAGAGAA GTTTGAGTGC CTTGTGGGGA AAGCTCGCAT CTGAAATATT GATGCAAAAC TGGGATATTG CTCTTGAAGA GCTCAACCGT CTTAAAGAGA TTATTGACTC AAAGAGTTTT TCATCGCCAT TAAACCAGGT GCAGAACAGG ATTTGGTTGA TGCATTGGGG TCTCTATATC TTTTTTAACC ATGATAATGG AAGGACACAG ATCATTGATC TTTTTAACCA AGACAAGTAT CTGAATGCCA TACAAACTAG TGCTCCACAC TTGCTGCGTT ACTTGGCAAC TGCTTTCATT GTCAACAAAA GGAGAAGACC TCAATTGAAA GAATTCATTA AGGTCATTCA GCAAGAGCAC TACTCCTACA AAGATCCTAT TATCGAGTTC CTGGCATGTG TGTTTGTCAA TTATGACTTT GATGGGGCTC AAAAGAAGAT GAAAGAGTGT GAAGAGGTCA TTGTGAATGA TCCATTCCTT GGCAAACGAG TTGAGGATGG AAACTTTTCA ACAGTACCAC TTAGAGATGA ATTTCTTGAA AATGCCCGCC TATTTATCTT TGAAACCTAC TGCAAAATTC ATCAAAGGAT TGACATGGGG GTGCTTGCTG AAAAATTGAA CCTGAACTAT GAGGAGGCCG AGAGATGGAT TGTGAACCTA ATCCGCACCT CAAAGCTTGA TGCCAAGATT GATTCCGAGT CAGGAACTGT AATCATGGAG CCTACTCAGC CCAACGTGCA TGAGCAGTTG ATAAACCACA CCAAAGGCTT ATCAGGACGG ACTTACAAGT TAGTGAATCA GCTCTTGGAA CATACACAGG CGCAAGCAAC TCGCTAATCA AATTTTTGCT GTGGAAACCT TTCCTTGATA AAACTCAGCT TCGCTTGACT GGAATT |
| Length | 1476 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17328254.. 17330728 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G57290.1 |
| Description | eukaryotic translation initiation factor 3E |
| TAIR curator summary | Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation. |
| Alias | [ATEIF3E-1][ATINT6][EIF3E][INT-6][INT6][TIF3E1][eukaryotic translation initiation factor 3E] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.7178 |
Ahg935092 | |
| 9.38083 |
Ahg489546 | Ribosomal protein L18e/L15 superfamily protein |
| 17.088 |
Ahg928154 | Ribosomal L22e protein family |
| 19.3391 |
Ahg479780 | rRNA processing protein-related |
| 24 |
Ahg937661 | Nucleic acid-binding, OB-fold-like protein |
| 24.98 |
Ahg322676 | nonsense-mediated mRNA decay NMD3 family protein |
| 25.3969 |
Ahg919727 | Translation protein SH3-like family protein |
| 28.9828 |
Ahg496255 | evolutionarily conserved C-terminal region 3 |
| 31.273 |
Ahg482088 | Ribosomal protein S3 family protein |
| 32.7109 |
Ahg486730 | ubiquitin 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|