Detail



ID : Ahg496255

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496255|fgenesh2_kg.8__2071__AT5G61020.1
Sequence
TGGTCTCCGC TAGTCAGTCG TTTACTCTCT CTCTTCTCTC CAACAAGTAG TTTCCGCCGC TAAGCCACTC ACTACGCAGC CATGGCAAAT CCTGATCATG TTTCAGATGT GCTCCACAAT TTGTCTATTG ATTCAGCAAC CAAGGTTTTA GCTCCTGATT CTGAAACTAA GTTGCAGGGG GCTTTTGGCG GAAACGGTAA TGACTTCTTG CTCAATGGTG ACTTAGTGGA GGCTACCAAA AATGGTAAAC CTAGTCTTTT GTCTAAAGAT GGAGGTTTGA CCAAAGACAA GGGATCAAAC CTGAAGAAAC TCGGGTACCA AAGTTCAGCT TATAACGCAA AGGGTTCGTA TGGGAAGGGT GCCTACTCTT ATGGGTACTA TTCCCCAGCA TATCAGTACC CAAGATATGG TTACAGTGGG AGCTATGCTT CTGGAAAAAC CAATCTTCAG TATCAGTACC TGACTCAGCA TGGAAGATCA GCTGGTACAG GTCAATCTTA TGGAGGATAC ATGGACAACA TTTACTCGAA TTATGGGATG TGTGGACCTT ACACGAATGG CTATGGGTAT GGCTCCTACG GTTATGACTC ATGGAAATAC ATGCCCAACT GGTATGCGGT TAACAATACC TACAAGACTA GAAATGGGTT TCATGGATAT GGCAAAGAAA ACATTGAGGG ATTAAATGAG CTGAATAGAG GTCCACGAGC TAAGGGTTTC AGCAGCCAAG ATGGTTCCAA GGTGATAACT GTGTCTTCGA AGGAGCAGAG AGTGACTGAG GCTGAGAAAC TCAGTGAAGA TGTGTCTCTT TTAGATCCCA AGGACTACAA CAAGATAGAT TTCCCTGAGA CCTACTCAGA AGCAAAGTTT TTTGTAATCA AGTCGTACAG TGAAGATGAT ATTCATAAAA GTATCAAATA CAGTGTTTGG TCCAGCACTC CTAATGGTAA CAAGAAGCTG GATGCTTCAT ATAACGAGGC AAAACAGAAG TTAGATGGCT GCCCCGTGTT TCTACTTTTC TCTGTAAACA CGAGTGGACA ATTTGTTGGT TTAGCCGAGA TGGTAGGCCC TGTTGATTTC AATAAGACTG TCGAATACTG GCAACAGGAC AAATGGATTG GTTGCTTCCC TGTTAAGTGG CATTTCGTTA AAGATATCCC TAATAGCTCC TTGAGGCATA TAACTCTGGA GAACAATGAG AACAAGCCGG TTACAAATAG CAGAGACACA CAGGAAGTAA AGCTAGAGCA AGGCGTTAAA GTCATCAAGA TTTTCAAGGA CCATGCGAGC AAGGCATGCA TCCTCGATGA TTTTGTGTTC TATGAGAATC GTCAAAAGAT TATCCAAGAG AGGAAAAGCA AACACCTGCA GATCAAAAAA CAGACGCTGG TGGCCAATGC AGACAAAAGA GACAACAGTG TAATGCCAAA AATTAATATT GTGAAACCTC AAGAGTCTAC TACAGCCTCA GAAGATACAG CAGCACTAGG AGTTGCGACT GAAGTGACTA GAGAATCGAA AGTGGTGAAA GAAAACGAGT TACCTGTGGA GAAAAATGCT GTTGCTACTG CCTGCTGAAC CAACCTTTGG TTGTAAGAGG GGAACTGGGT GGGCTGTTTT AGGCGATTTA GAGTGTTTCC CTAGTTTTGT TCCATTCCTG AATTTGCAGA CTTTTTGTTT TGTTTTGTTT GGAACCGAGT TGCAAGGGTA GTGGCTTAGT AGATGAAGTT TTGGCATGAG CATTCATCAT CTTGCAGTTA ATCTCTATCC CTTGGGTAGT GGTCCAATAT ATGAGGATAT GGGTAAAAGA TTGATATTGA ATCCAGCTTA TTCAGTTTTA TA 
Length1842
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18632682.. 18635349
Download Sequence
A.thaliana
AGI-codeAT5G61020.1
Descriptionevolutionarily conserved C-terminal region 3
TAIR curator summary
Alias[ECT3][evolutionarily conserved C-terminal region 3]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg482088 Ribosomal protein S3 family protein
7.48331 Ahg488918 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
7.68115 Ahg933688
9.64365 Ahg899270 Small nuclear ribonucleoprotein family protein
9.79796 Ahg490654 FMN-linked oxidoreductases superfamily protein
10.3923 Ahg474678 homolog of nucleolar protein NOP56
12.3288 Ahg487065 Ribosomal protein L4/L1 family
13.3041 Ahg486730 ubiquitin 5
13.8564 Ahg473244 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6
15.4919 Ahg478024 GTP-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression