| Annotation |
|---|
| Description | jgi|Araly1|486216|fgenesh2_kg.5__2208__AT3G57660.1 |
| Sequence |
ATGGCTCACG TTCAAACCAC AGAGGTGTGT TTGAGTTTTC ACCGCTCCGT ATTGTTTCCC ATGGGAGCTT CCCAGGTGGT TGAATCTGTT AGATTCAGTT TCATGACAGA GCAAGATGTT CGAAAGCATA GTTTTCTGAA AGTTACGAGT CCTATATTAC TCGATAACGT GGGCGAACCT TATCCTGGTG GTCTCTATGA TCCTAAACTT GGTCCTATAG AGGATAAAAA AGCTTGTGAT ACATGTGGTC AGCTCAATCT TGCTTGTCCA GGACATTGTG GTCATATCGA GCTTGTCTAT CCTATTTACC ATCCTTTGCT CTTCAATCTT CTTTACAATT TTTTGCAGAG GACCTGTTTC ATCTGTCATC ATTTTATGGC AAAACCTTAC GATGTTGAAA GAGCTGTTTC TCAGCTGAAA CTCATCATTA AAGGTGATAT AGTTTCTGCA AAGCAATTGG AGTCCAACAC TCCCACTAAG TCAGATTCTA GTGATGTAAG CTGTGAATCA GGTGTAACCA CTGATTCATC CGAAGGATGT GAAGATTCTG ACATGGAAGA TCAGAGATGG ACATCTCTTC AGTTTGCTGA AGTCACTGCT GTCATGAAGA ATTTTATGAG GTTGTCATCA AAGTCGTGTA ATAGATGCAA AGCAGTAAAT CCTCAACTAG AGAAGCCTAT GTTCGGATGG GTTCGCATGA AAGCAATGAA AGGATCCGAC ATTGTAGCTA ATGTAATTCG AGGGCTTAAG CTAAAGAAGT CCACTAGCAG TGTTGAAAAT CCAGATGACT TTGATGATAG TGGCATCGAT GCATTATCAG AAGTTGAAGA TGGTGATAAA GAGACAAGAG AAAAGTCTAC AGAAGTAGTG AAAGAGTTTG AAGAGCATAA CAATAGTTCT AAAAGAGACC TTTTGCCGAC TGAGGTCAGG GAAATCTTAA AAGATCTGTG GGAGAATGAG CACGACTTTT GCTCCTTCAT TGGTGATCTT TGGCAGAGTG GATCTGAAAA AATTGACTAC TCTATGTTCT TTTTGGAGAG TGTTCTAGTG CCCCCTATTA AATTTAGACC TTCAACAAAA GGAGGTGATA GTGTTATGGA ACATCCTCAA ACCGTAGGAC TAAATAAGGT CTTAGGTTCC AATATACAAC TCGGGAATGC GTGTACTAAC AAATTAGATC AGTCTAAGAT AATTTCTAGA TGGATGAATC TTCAAGAATC AGTCAATGTC TTGTTTGATA GCAAAACTGC GACAGTTCAA AGCCAGAGAG AGGGCTCTGG AATATGTCAA TTGCTGGAGA AGAAAGAGGG ACTATTTCGG CAAAAAATGA TGGGAAAGAG AGTGAATCAT GCATGCAGAT CTGTGATATC TCCAGATCCT TATATCGCTG TTAATGACAT TGGAATTCCT CCTTGTTTTG CTTTGAAATT GACGTATCCC GAGAGGGTGA CTCCTTGGAA TGTGGAGAAG TTAAGGGAAG CTATCATTAA TGGTCCTGAT ATTCATCCTG GAGCTACACA TTACTCTGAC AAATTATCTA CAGTGAAGTT GCCTTCTACC GAAAAAGCAC GAAGAGCAAT TGCAAGAAAA TTACTGTCCT CACGAGGAGC CACTACAGAA CTTGGGAAAA CTTGTGATAT CAACTTTGAA GGTAAAACTG TCCATCGACA TATGCGAGAT GGTGACGTCG TCCTTGTGAA TCGTCAGCCA ACATTACATA AACCTAGCTT AATGGCGCAC ATCGTCCGTG TTCTAAGGGG GGAGAAAACA CTTCGTCTCC ACTATGCAAA TTGCAGTACA TACAATGCAG ATTTTGATGG TGATGAGATG AATGTGCATT TTCCACAAGA TGAGATTTCA CGTGCTGAGG CCTACAATAT TGTCAATGCT AACAACCAAT ATGCTAGGCC CTCTAATGGC GATCCACTTC GAGCTTTAAT TCAGGATCAT ATCGTCAGTT CCGTTTTGCT TACTAAAAGG GACACATTTT TGGACAAAGA TCATTTTAAT CAGCTTCTCT TCAGTTCCGG TGTGACTGAC ATGGTACTCA GTTCTTTTTC TGGAAGATCT GGCAAGAAAG TCATGGTATC AGCTTCTGAT GCAGAACTGT TGACAGTCAC GCCTGCTATT TTGAAACCAG TGCCTCTTTG GACTGGGAAG CAGGTCATCA CTGCAGTGTT GAATCAGATA ACCAAAGGTC ACCCGCCGTT CACCGTAGAG AAAGCTACCA AACTTCCAGT TGATTTCTTC AAATGTAGAT CTAGAGAAGT AAAACCTAAC AGTGGAGATT TGACCAAAAA GAAAAAGATT GACGAGTCAT GGAAACAGAA TCTTAATGAA GATAAATTGC TCATCAGAAA AAATGAATTT GTCTGCGGTG TGATTGACAA GGCTCAGTTT GCTGACTATG GGTTGGTTCA TACAGTGCAT GAGCTTTATG GTTCAAATGC TGCAGGAAAT CTGCTCTCCG TTTTTAGTCG TCTCTTTACA GTCTTTCTTC AGATTCACGG TTTCACCTGT GGAGTTGATG ATCTTATTAT TTTAAAAGAT ATGGATGAAG AGAGGACGAA GCAACTTCAA GAGTGTGAAA ATGTTGGTGA AAGAGTACTC CGTAAGACCT TTGGCATAGA TGTTGATGTT CAGATAGATC CTCAGGACAT GAGATCCAGA ATAGAACGAA TTCTTTATGA GGACGGGGAA TCTGCTTTGG CATCTTTGGA CAGGAGCATC GTAAATGATC TCAATCAGTG TTCAAGCAAG GGTGTGATGA ACGATTTGCT GTCTGATGGG TTACTGAAAA CACCCGGAAT GAATTGTATA TCGCTAATGA CTATATCTGG GGCTAAGGGC AGTAAGGTCA ACTTCCAGCA AATCTCTTCG CATCTTGGCC AGCAAGATTT AGAAGGAAAA AGAGTTCCCC GAATGGTTTC TGGGAAGACA TTACCTTGTT TCCATCCATG GGACTGGTCC CCTAGAGCTG GGGGATTTAT TAGTGACAGA TTCCTTAGTG GTCTTCGCCC CCAAGAATAT TACTTCCATT GCATGGCTGG ACGAGAAGGG TTAGTTGATA CTGCAGTGAA GACATCGCGT AGTGGGTATC TGCAAAGATG CTTGATGAAA AATCTTGAGA GCCTTAAAGT CAACTATGAT TGTACTGTCC GGGATGCTGA CGGGTCCATC ATTCAGTTCC AATATGGTGA AGATGGTGTG GATGTTCATC GGTCTAGCTT CATTGAAAAG TTCAAAGAAC TGGCAATAAA TCAAGATATG GTCCTTCAAA GATGCAGTGA AGACATGCTA TCTGGAGCCA GTAGTTACAT CAGTGATCTG CCTATTAGTC TTAAGAACGG AGCTGAGAAG TTTGTAGAGG CAATGCCTAT GAATGAACGT ATTGCTTCTA AATTTGTGAG ACAAGAAGAA CTACTGAAGC TGGTGAAGTC AAAATTCTTT GCAAGTCTTG CGCAGCCAGG GGAGCCTGTA GGTGTACTTG CTGCTCAATC TGTAGGAGAG CCATCAACAC AGATGACGTT GAATACTTTC CATCTTGCTG GACGTGGAGA GATGAATGTG ACACTTGGAA TTCCACGTTT ACAAGAGATT TTGATGACAG CTGCAGCAGA CATTAAGACA CCAATAATGA CATGCCCGTT GCTGAAAGGC AAAACAAAGG AGGATGCAAA TGATATCACT GGTAAGTTGA GGAAGATTAC GGTGGCAGAT ATAATAAAGA GTATGGACCT TTCAATTGTA CCATATACGG TTTATGAGAA TGAAGTTTGT AGTATTCACA AGCTTAAGAT AAATCTCTAT AAGCCAGAGC ATTATCCGAA GCACACTGAT ATCACCGAAA AAGACTGGGA AGAGACGATG ACGGTTGTGT TTTTGAGGAA GTTGGAGGAC GCTATAGAGA TCCACATGAA AATGCTCCAT AGAATAAGGG GCATATGCAA TGACAAGGGT CCAGAAGCTG GAAATGAAAC TGATAATGAT GATTCTGTAA GTGGAAAGCA GAATAAAGAT GATGGTGATG ATGATGGCGA GGGTACAGAG GTTGATGATC TTGGTTCAGA TGCACAGAAG CAGAAGAAAC AAGCAACAGA TGAGATGGAT TATGAAGAAA ACTCTGAAGA TGAAACGAAC GAACCATCGT CAATCAGTGG AGTAGAGGAC CCTGAGATGG ATAGTGAGAA TGAGGACGCA GAAGTTAGCA AGGAAGATAC TCCGGAACCG CAGGAAGAGG CAGATGTTAG CAAGGAAGAG ACTATGGAAC CACAAAAAGA GGTAAAAGCG GTAAAGAATG TCAAAGAACA GAGTAAAAAA AAGAGACGGA AATTTGTTGG AGTTAAAAGT GACAGACATA TCTTCGTGAG AGGTGAAGGA GAGAAATTTG AGGTCCATTT CCAGTTTGCT ACAGATGACC CTCATATTTT ACTTGCCCAG ATTGCTCAAA AAACAGCGCA GAAGGTTTAC ATCCAGAATT CTGGGAAGAT TGAACGATGC ACAGTGGCTA ATTGTGGTGA TCCTCAGGTG ATCTACCATG GAGACAATCC AAAGGAGAGA AGAGAAATAT CCAACGATGA AAAGAAAGCC TCGCCAGCTC TCCACGCATC AGGAGTTGAT TTCCCTGCAC TCTGGGAATT CCAAGATAAA CTTGACGTCA GGTACTTGTA CAGCAACAGC ATTCACGATA TGCTCAACGT TTTTGGAGTT GAAGCAGCTA GAGAAACAAT AATCAGGGAA ATAAACCATG TCTTCAAATC ATATGGTATT TCTGTAAGCA TCAGACACTT GAACCTCATT GCGGATTATA TGACCTTTTC TGGTGGATAC CGACCAATGA GCCGTATGGG AGGAATTGCA GAATCAACTT CACCATTCTG CAGAATGACA TTTGAAACAG CCACTAAGTT CATTGTCCAA GCAGCTACTT ATGGAGAAAA GGACACATTA GAAACTCCCT CTGCTAGAAT CTGTCTCGGC TTGCCCGCGC TTTCAGGAAC CGGATGCTTC GATTTGATGC AGAGAGTGGA GCTCTGA |
| Length | 5037 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17497810.. 17507308 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G57660.1 |
| Description | nuclear RNA polymerase A1 |
| TAIR curator summary | Encodes a subunit of RNA polymerase I (aka RNA polymerase A). |
| Alias | [NRPA1][nuclear RNA polymerase A1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg321151 | ARM repeat superfamily protein |
| 8.12404 |
Ahg490186 | Transducin/WD40 repeat-like superfamily protein |
| 8.77496 |
Ahg496832 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 12.2474 |
Ahg480227 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| 12.3288 |
Ahg491436 | La protein 1 |
| 12.6095 |
Ahg484092 | microtubule-associated proteins 70-3 |
| 12.6886 |
Ahg487351 | E3 ubiquitin ligase, putative |
| 13.5647 |
Ahg490687 | Homeodomain-like superfamily protein |
| 13.6015 |
Ahg477645 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein |
| 15.4919 |
Ahg479365 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|