Detail



ID : Ahg486445

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486445|fgenesh2_kg.5__2437__AT3G59810.1
Sequence
AAATAATAAA ACCCTTTAGG ACCAATTCAT TATTTCTTCG CTCTCTCTGT CTCGCACTCG AGTAGGTGGT CAGTTAAATA AAGGATCGTG CTTAGAAGAA GATGAGTGGT GTTGGAGAGA AAGTTTCTGG AACGACAAAG ACACCTGCAG ATTTCCTCAA ATCCATCCGT GGGAGACCCG TTGTTGTCAA GCTCAATTCT GGTGTTGATT ATCGAGGCAT TCTTACTTGT CTTGATGGGT ATATGAACAT AGCAATGGAG CAGACAGAGG AGTATGTAAA TGGGCAGCTC AAGAACAAAT ATGGTGATGC CTTTATCCGT GGAAACAACG TTCTTTACAT CAGTACGGTA AAGATGACTG TAGCGGACGG AGCCTAGGCC CATCATGATA CATCATCAGC AACAACAACA TCAGTGGTCA TGTTATGGCT GCCATTTTTG TTGTCTTCTT CTACCTCATA TTAAAAGAG 
Length469
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18454554.. 18455725
Download Sequence
A.thaliana
AGI-codeAT3G59810.1
DescriptionSmall nuclear ribonucleoprotein family protein
TAIR curator summary
Alias[LSM6A][SM-like 6A]
Gene coexpression
MR
MR Locus Description
17.6635 Ahg481765 related to AP2.7
21.166 Ahg488536 SART-1 family
21.8403 Ahg493708 Serine/threonine-protein kinase Rio1
45.913 Ahg488799 Aluminium induced protein with YGL and LRDR motifs
52.5357 Ahg480488 CCCH-type zinc finger family protein
69.5845 Ahg476723 ER lumen protein retaining receptor family protein
76.1249 Ahg474716 dehydrin family protein
77.1362 Ahg481114 K-box region and MADS-box transcription factor family protein
81.0925 Ahg950055 polygalacturonase inhibiting protein 2
87.9773 Ahg935400 Ras-related small GTP-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression