Detail



ID : Ahg486475

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486475|fgenesh2_kg.5__2467__AT3G60100.1
Sequence
AAGAATGGTG GTTTTTCGTA GCTTATCAGC CATTTCAAGG CTTCGGTCTC GAGCAGTGCA ACAATCCTCA CTTAGCAACT CCGTCAGATG GCTCCACTCT TCTGAATTGG ACTTGAAGTC GCAGATGCAA GAGATCATTC CAGAACAACA GGACCGTTTG AAGAAACTGA AATCAGAACA TGGAAAGGTC CCAGTGGGGA ACATCACCGT TGATATGGTA CTTGGTGGAA TGAGAGGGAT GACTGGATTA CTCTGGGAAA CCTCATTGCT TGATGCAGAT GAGGGAATAC GCTTTAGAGG CATGTCGATT CCTGAATGCC AAAAAGTATT ACCTTCAGCT CAGTCTGGAG AAGAGCCCTT GCCTGAGGGT CTTCTGTGGC TTCTGTTAAC TGGAAAGGTG CCAACTAAAG AGCAAGTTAA TGCTTTGTCA AAAGAGTTGG CTCATCGTGC GGCTGTGCCA GCTATAGATG CCCTGCCTTC AACAGCTCAT CCAATGACTC AATTTGCTAG TGGGGTTATG GCCCTTCAGG TTCAAAGTGA GTTTCAGAAG GCATATGAGC AGGGTGATAT TCATAAGTCA AAGTACTGGG AGCCAACCTT TGAGGATGCA CTAAACTTGA TTGCTCGTGT TCCTGTTCTA GCTTCATACG TTTATCGAAG GATGTACAAG GATGGTAGCA TCATTCCATT AGATGATTCT TTGGATTATG GTGCAAATTT TTCACACATG CTGGGATATG ATAGTCCTCA GATGAAAGAA CTCATGAGGC TTTATGTCAC TATCCACAGT GATCATGAAG GTGGAAATGT TAGTGCTCAC GCTGGTCACC TGGTTGGGAG TGCACTTTCA GATCCATATC TTTCATTTGC AGCTGCTTTA AATGGTTTAG CTGGTCCACT CCATGGTTTG GCTAATCAGG AAGTTTTGCT TTGGATCAAA TCAGTTGTCG AGGAATGTGG AGAAAATATT TCAAAGGAAC AGCTAAAAGA TTATGTCTGG AAAACGTTAA ACAGTGGCAA GGTTGTTCCA GGATATGGCC ATGGTGTTTT ACGTAAACCG GATCCAAGAT ATGTATGCCA AAGAGAGTTT GCCTTGAAGC ATCTACCTGA TGATCCTCTT TTTCAGCTGG TCTCAAAGCT TTATGAAGTG GTGCCTCCTA TTCTAACCGA GCTGGGAAAG GTCAAGAACC CGTGGCCTAA CGTTGATGCT CATAGTGGAG TGCTGCTGAA CTACTATGGT CTAACCGAAG CAAGATACTA CACAGTGCTT TTTGGAGTCT CAAGAAGTCT TGGCATCTGT TCGCAGCTGA TATGGGACAG GGCACTTGGA CTGCCACTTG AGAGACCAAA GAGTGTAAAC ATGGACTGGC TCGATAACTT CATGCTCTTG AACCACTAAG TTAATCGCTC ACTGTTGTTG GTCGAGGTTC TCTCTTTCAT CAAACCAGCC TTCTCTTCCA TTTGATTGGG TAGCTTTTGG CACTTTTAGA GAGAAAAAGA ACGATTTTTC GTCTAAATTT TGTTTCTACA GAGTTTTCAT TTTGGTACTT CTTCAAAAAC AATAATGTCA AACAAGTGAA GAAACAGTCT TTCTTAGATT GAGACACC 
Length1608
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18595851.. 18599518
Download Sequence
A.thaliana
AGI-codeAT3G60100.1
Descriptioncitrate synthase 5
TAIR curator summary
Alias[CSY5][citrate synthase 5]
Gene coexpression
MR
MR Locus Description
14.6969 Ahg921129 AMP-dependent synthetase and ligase family protein
24.8797 Ahg331043 zinc knuckle (CCHC-type) family protein
41.3763 Ahg321053 myosin XI D
44.8999 Ahg493691 sucrose synthase 5
45.1664 Ahg940460
53.2729 Ahg480002 Sec14p-like phosphatidylinositol transfer family protein
55.9643 Ahg482462 phosphatidylinositolglycan synthase family protein
57.0614 Ahg471756 gibberellin 3-oxidase 1
67.4537 Ahg890555 phosphatidylserine decarboxylase 1
73.1779 Ahg487321 conserved peptide upstream open reading frame 64
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression