Detail



ID : Ahg921129

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921129|scaffold_102410.1
Sequence
ACATAAACAA GAATCAAAGT ATGGAACTCT TACTTCCACA CCCTTCGAAC TCAACACCTC TCACCGTCCT CGGCTTCTTG GATCGAGCCG CCTCCGTCTA TGGCGACTGT CCGTCCATCC TCCACGCCAC TAACACCGTC CACACTTGGT CCGAAACCCA CAACCGCTGT CTTCGAATCG CCTCGGCTCT CACTTCATCC TCTCTCGGCA TAAACCAAGG CCAAGTCATC TCCGTCGTAG GCCCCAACGT CCCGTCTGTT TACGAACTTC AGTTTGCTGT CCCAATGTCC GGAGCCATCT TAAACAACAT CAACCCTCGC TTGGACGCAC ATGCACTCTC TGTCCTCCTG CGTCATAGTG AATCTAAGCT CGTTTTTGTC GATCCCAACT CAATCTCCTT AGTCCTTGAA GCAGTCTCGT TTTTGGGACA ACACGAGAAA CCTCACCTTG TCCTCCTCGA AGACGACCAA GAGGACGGTT CTTCGTCTGC TTCGGCCGCA TCAGATTTTC TTGACACATA CCAAGGAATT ATGGAGAGAG GAGATTCGAG ATTCAGGTGG ATCCGTCCTC AAACCGAGTG GCAGCCAATG ATTCTCAACT ACACTTCTGG AACAACGTCG TCTCCCAAAG GAGTTGTGCT TAGCCACAGA GCAATTTTCA TGCTAACCGT TAGCTCATTG CTTGATTGGC ATTTTCCGAA CCGGCCGGTT TACTTGTGGA CTCTACCAAT GTTCCACGCC AACGGTTGGG GATACACTTG GGGCACTGCA GCGGTTGGAG CCACCAACGT CTGCACGCGT AGAGTCGATG CGCCGACTAT ATATGACTTG ATCGATAAGC ATCACGTAAC TCACATGTGT GCGGCACCAA TGGTTCTCAA CATGCTAACC AATTACCCGT CTCGTAAACC GCTAAAGAAC CCGGTTCAGG TTATGACCGC TGGAGCTCCA CCTCCGGCAG CCATCATCTC CAGAGCAGAA ACCCTAGGTT TCAACGTCGG TCATGGGTAC GGTTTAACGG AAACCGGAGG CCCGGTTGTG TCATGTGCTT GGAAGGCTGA GTGGGATCAT CTTGATCCAT TGGAGAGAGC TAGACTGAAA TCAAGACAAG GAGTAAGAAC CATCGGATTC GCGGATGTCG ATGTTAGGGA CCCGAGAACC GGGAAGAGTG TGGAACACGA CGGAGTTTCT GTAGGAGAGA TCGTTTTAAA AGGTGGGTCG GTTATGCTTG GTTACTACAA AGACCCGGAA GGAACAGCGG CGTGTATGAG AGAGGACGGA TGGTTCTACA GCGGAGACGT AGGGGTTATA CATAAAGACG GTTACTTGGA AGTTAAAGAC CGGTCAAAGG ATGTGATCAT ATGCGGAGGA GAGAACATAA GTAGTGCTGA GGTTGAGACG GTTCTGTATA CAAATCCGGT GGTGAAGGAA GCTGCGGTGG TGGCTAAACC GGATAAAATG TGGGGAGAGA CGCCGTGTGC TTTTGTGAGC TTGAAGTATG ATAATAATGG TAATGGTTTG GTGACAGAGA GGGAAATAAG GGAGTTTTGT AAGACAAAGT TACCTAAGTA TATGGTTCCG AGGAAAGTGA TTTTTCAGGA GGAGCTTCCA AAGACTTCTA CGGGAAAGAT CCAAAAGTTT CTTCTTAGAC AAATGGCTAA GTCCCTGCCT TAAAGATTCA CTTAAGTTAT TGAG 
Length1694
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8876169.. 8877975
Download Sequence
A.thaliana
AGI-codeAT1G21540.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg913177 Leucine-rich repeat (LRR) family protein
11.6619 Ahg930655 Tetratricopeptide repeat (TPR)-like superfamily protein
14.6969 Ahg486475 citrate synthase 5
18.4932 Ahg475553 ribosomal protein S11
20 Ahg476776 Arabidopsis protein of unknown function (DUF241)
22.4499 Ahg481535 Ran BP2/NZF zinc finger-like superfamily protein
24 Ahg943674 transducin family protein / WD-40 repeat family protein
25.2982 Ahg349113
27.7128 Ahg473002 P-glycoprotein 14
30.5941 Ahg485385
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression