| Annotation |
|---|
| Description | jgi|Araly1|486510|fgenesh2_kg.5__2502__AT3G60370.1 |
| Sequence |
CGCCGGAGGG AGAAGCTATG GTGACGATTC TATCAACTAC TCCTCTCTCT CCAAGACTTA CATTTCTCTG TGAAACAAAA CTGTCATTAT CTCGGAGCAG CAAACGCTCG GTATGTTGTT CATTGAGTGA AGAATCAAAA GACCAATGCT TGAGTCGGAG AAGTCTTGTT TATGTTTTGG TTGCTTCGCC GTGTTTGTTG TTTCCGGCGT TATCTTCATC TGCGAAGACT AAATCAAAGA GCCCTTATGA TGAGAGACGG TTACTGGAAC AGAACAAGAG GATACAGAGA GAGAACAATG CTCCTGACGA ATTTCCTAAC TTTGTTAGAG AAGGTTTTGA GGTTAAGGTA GTAGCTTCAG AGAATTACAT CAAGGCTGAT TCTGGCCTCA TATATCGGGA TTTCGATGTT GGTCAAGGTG ATTCCCCAAA AGATGGTCAG CAGGTGACTT TTCACTACAT TGGCTACAAT GAGTCTGGAA GGCGAATAGA TAGCACTTAC ATACAAGGTT CTCCTGCGAG AATTCGCATG GGGACCAATG CACTTGTTCC AGGATTTGAA ATGGGAATTC GTGACATGAA GCCCGGTGGG CGAAGAAGGA TTATTATCCC TCCAGAATTG GGACCTCCGG TGGGACCTTC GACCTTCTTC AGCTCAAAGC AATTTGAAGT TTTCGACGTG GAGTTGCTCA GTATCCAGAA TTGTGAGAGG AGGACAATAA TAGGATTCTA CTCAGACGTC ACATGCAGTT AACTTCTAAA TGATGGTCAC CACTAAGCTT CAATGAATCT GCATTCACCA TTACTCGAAA CTCTATATCT GCACGGCAGA TGAAAACTGC AAAGAAACAA AAAGAACAAA TCTTCTTTGC TTAGGCATTT ATCTTATGGG TTTCATGCAG AGGTGCACAA TTACATAGAG AGAGATAAAG ATCGTGTAAA GTCTCGACCT TTTTCATAAT CGTAGTTTAC TTTTGTTGCT TGGTTGATCA CGTTTTAAGC GTTT |
| Length | 1004 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18736974.. 18738756 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G60370.1 |
| Description | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
| TAIR curator summary | Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg495281 | Dihydrodipicolinate reductase, bacterial/plant |
| 6 |
Ahg929946 | Ribosomal L18p/L5e family protein |
| 6.7082 |
Ahg480618 | Uncharacterised conserved protein (UCP030210) |
| 7.2111 |
Ahg485272 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 8 |
Ahg317881 | alpha/beta-Hydrolases superfamily protein |
| 13.5647 |
Ahg317863 | nudix hydrolase homolog 26 |
| 17.7482 |
Ahg481514 | uroporphyrinogen-III synthase family protein |
| 20.1494 |
Ahg472512 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 21.4243 |
Ahg484185 | IQ-domain 29 |
| 21.9317 |
Ahg489312 | 30S ribosomal protein, putative |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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|
| Growth Chamber expression |
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