Detail



ID : Ahg486720

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486720|fgenesh2_kg.5__2712__AT3G62130.1
Sequence
TCTCTCTCTC GATTTGGGAT TCGAGACGAA ACCCTAGCTC TGATTTTTTA TTCCGATGGA GTCGGGCGAG CGGCGCAATG GCGATTCGAT GAGTCACAAT CACCGCGCAC CGAAGAAGCC ACGCCTCGTT GGGTTATTAT CCGAGTCAGA TATCGACTCC GAGTTCGCTC ACCACCAGAC CGGTGTTGCC AGAATCAACA ACGGTAGCTT CGGCTGCTGT CCTGGTTCCG TTCTCGAGGC GCAGCGTGAG TGGCAGCTTC GTTATCTCCG TCAGCCTGAT GAGTTCTACT TCAACGGTCG CCGTCGTGGA CTTCTCGCTT CTCGAACTGT GATCAGTGAC CTAATCAACG CCGATGATGT TGACGAGGTC TCGCTCGTTG ATAACGCAAC CACTGCTGCT GCTATTGTTC TTCAGAAAGT TGGAAGGTGT TTCTCTGAAG GGAAGTATAA GAAGGAAGAT ACTGTAGTGA TGTTTCACTG TGCGTTTCAG AGTGTGAAGA AGTCGATTCA GGCTTATGTC TCTCGTGTGG GAGGTTCTAC TGTTGAGGTT AGGTTACCTT TCCCTGTTAA TTCGAACGAA GAGATTATCT CCAAGTTTAG AGAAGGATTA GAGAAAGGTA GAGCCAATGG TAGAACGGTT AGGTTAGCTA TCATTGACCA TATAACGTCG ATGCCGTGTG TTTTGATGCC GGTACGAGAA TTGGTTAAAA TCTGCAGAGA AGAAGGTGTG GAGCAGGTTT TTGTTGATGC AGCTCATGCC ATTGGTAGTG TTAAAGTTGA TGTTAAAGAA ATCGGAGCTG ATTACTATGT GAGTAATCTA CATAAATGGT TCTTTTGTCC GCCATCTATC GCGTTTTTTT ATTGTAAGAA ACGTGGTTCT GAGTCTGATG TTCATCACCC TGTGGTGTCT CATGAGTTTG GAAATGGTTT GCCTACAGAG AGTGCCTGGA TTGGGACTAG GGATTACAGT TCGCAGCTTG TGGTTCCATC GGTAATGGAG TTTGTAAACA GGTTCGAGGG AGGGATCGAA GGGATTATGA TTAGGAACCA TGATGAAGCT GTTAGAATGG GGTTAATGCT GGCTGATGCT TGGGGAACGA ATCTCGGGTC ACCTCCTGAA ATGTGTGTTG GGATGGTTAT GATCGGTTTA CCTTCAAAAC TTTGTGTTGA AAGTGATGAA GATGCTACTA AGTTGCGGTC ATATCTGCGG GTGCATTACG CAGTCGAGGT TCCAGTTTAT TTTCTCGGAT TGAGGGATGG AGAGGAAGGA GTGAAAGACA AAGACAGTGG ACTAATTACT GCCTATGTTC GGATCTCTCA TCAGATTTAT AACAAAACTG AGGATTATGA GAGATTGAGA GACGCAATAA CAGAGTTAGT CAAGGATCAA ATGACATGTC AAAACCTTCC TTCAGTGTAG TGACCAGGTA TACTTTGATA ATCCACAAGG GCCTCATTCA GACTCTTTCA TAGATCAAGC ACATGTTTCG GGTGTAACAA TAAGGCGTTG GAAGAGCCAC GAGAAAAGAT TCCAGAGATA ACATTTATTG ATGAGCTTGT GGAGGAGCGG CTTGCAATGG AAGAAGAAGC TAACCTTGAG AGGCCCTTTC TTTTATTAGT CTTTTTAACG TTTAACGGCT TTGTATGATG ATTATTGCAA ATAAAATGAT GTTCATCTAA TCTATCTTCC TCAAACATTC TGCTTTCGAA TTGTCGCAAT TCCAATAACT TTTCCTTATT GAAAACTTTT TATTATCTCA CATTGATAAA CAATAAGCAT ATTCATACAT ATGTAATGAC AC 
Length1802
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19566839.. 19568815
Download Sequence
A.thaliana
AGI-codeAT3G62130.1
DescriptionPyridoxal phosphate (PLP)-dependent transferases superfamily protein
TAIR curator summary
Alias[AtLCD][LCD][L-cysteine desulfhydrase]
Gene coexpression
MR
MR Locus Description
3 Ahg487674 Transducin/WD40 repeat-like superfamily protein
9.8995 Ahg947180 Pseudouridine synthase family protein
10.9545 Ahg470500 dentin sialophosphoprotein-related
14 Ahg483938 spliceosomal protein U1A
16.7332 Ahg476667 DNA glycosylase superfamily protein
20.6155 Ahg479746 putative mitochondrial RNA helicase 2
22.1359 Ahg485482 VPS35 homolog C
22.6274 Ahg351718 ATPase family associated with various cellular activities (AAA)
25.2587 Ahg938693 Glycosyl transferase family 4 protein
25.6905 Ahg495932 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression