Detail



ID : Ahg486728

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486728|fgenesh2_kg.5__2720__AT3G62200.1
Sequence
CCCTTATTCG AAGATTCCTC TGGCGATTCG AAGTAGCTTA CGGCGGCGGA AGAACGATGT CGACAAACAC GACGAGCGAT GGGGATTTCG GAACGGCTTC AGTGGCGGCG GAGATGGCTG AGGCTCAGTA CGTGAGGGCG AAGACTTCAG TGTGGTGGGA TATAGAGAAT TGTCAAGTCC CAAAAGGTCT TGACGCTCAT GGAATTGCTC AGAATATTAC TTCTGCGCTT CAGAAGATGA ACTATTGTGG TCCTGTTTCT ATCTCTGCTT ATGGTGATAC CAATCGCATC CCTTTGTCGA TCCAACACGC TCTTAATTCC ACCGGAATTG CGCTCAACCA CGTCCCTGCC GGCGTGAAAG ATGCGAGTGA TAAGAAGATC TTAGTGGACA TGTTGTTTTG GGCGTTGGAC AATCCTGCGC CTGCAAATTT TATGTTAATA TCAGGAGATA GAGACTTTTC CAATGCTCTT CACGGATTGA GAATGAGACG TTACAATGTT CTATTGGCAC AGCCTCTCAA AGCATCTGTG CCACTTGTTC ATGCTGCAAA GACTGTGTGG CTTTGGACAA GCCTATCTGC TGGAGGAATC CCTCTTACAC GAGCCGAAAG CTTACAACTT GTTGCCAACC AGACGACCCC AACATCTGGT TCAGAGATTC CATCAAGCCA ACCTCTGGAT TCAAATTTTG ACTCCAGGAG AGTCTTTGAC AACAAACCCA AGGTGAAATA CCTTCCAAAA CAATCAAATC ATCAGCCTAA CAATAACTAC CGTCAGCAAC AGAACACTCA AGGGAAACAG TTTAAGAAAG CCCCACATGA GTTCTTTGGC AGTAGCGAGC CATCTGTTTC CACTAGCAGA CCTCCTCCCA ATTTACCCTC TAGCAATGTT AACACTTTCC CTGGTAATGT GATGACTAAT CCTCAGAATC AGAATCAGTA CAATTATCCT CCTCGACCTG GTCCTTTCCC TCCCAGACAA CCTTACCCTA ACCCTGATCC ATCTTGGAAT AATGGAAATA GCATCCCAAA TCATGCTCAG AACTATTATC CCAATGCTGG CAGACCAGGT GCTTCTAATA TGCGGCCACC TTATGGTAAT GTTTTCCGTC CGTACCGCCC AGAGAATCTG AATCCTCCTA TTGGTAATGG TTTCCGTCCA ATGCAGCACC CGCGAAATGA CGGGCCTAGG TTTCCGTCTC CACCTCTCTT TACTGCACCT GATATCAGCA ATCTAAGTGT GTCTCAATAT CCTAGTCAAA CTCAAGATCG TCCTAATTTT AATCCTCAAG TTAGACAAGA ATTCAGACCA AAGACGGAAT CCTCATATTC TCATAATGGT CCAAATAAGG GTTATCTTAC ACGGACTAGT AGTGCCCCAG TAACTCATTC TACGACAACC ACTGGCTACA CCAACTCTTC CAGTCCTGGA GTTCCACCTT CTCAGCCTCC AGTGGTTACT GGATCTGGTT CTAGCAATGG TATGTGGGGA ACACAAGAGT GTCCTCCACC ATCTGAGTAT GTTCAAGGCC TTATAGGCGT TATCTTACAT GCTCTAAACA TCTTGAAAAC TGAAAAAGTT ATGCCTACCG AGCCAAATAT CTCGGATTGC ATTCAGTACG GAGATCCAAA GCATCGCGGT ACTGACATAA AGAAGGCTTT GGAAAGTGCA TTGGAGCATC ATATGATCGT GGTGTCAAAT GTAGGTAAAC TAAAGCTCTA CATTGGCAAA AATGAAGCTC TTTGGAACTG TGTAAACCCT TTAGGGGCAA ACGCTAAGCA ATACCCAAAA GCAACTTGGG ATAGAATACA AGAGTTTCTA ACCTCATCTT CTGGTCGTGT GGCGTTTACG GCAACTCAGT GCAGGTATGA AGCTGCCCAA GTTCTGAAAA AGGAATGTCT AAAAGAGCTT ACTTTAGGTG ACATACTACA GATCTTGAAT ATAACAGCAA CCACAAAGAA ATGGATTACT CATCATCAAA CCGGATGGAA ACCAATTACT ATTAGCCTTG CTGCAAAGAC AAAAGAGACA ACAAACGAGA CAGCTACCGA AACGGATACA GGTATCCAAA CTGTTGCCTG 
Length2080
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19589163.. 19591545
Download Sequence
A.thaliana
AGI-codeAT3G62200.1
DescriptionPutative endonuclease or glycosyl hydrolase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg920110 MBOAT (membrane bound O-acyl transferase) family protein
8.3666 Ahg487631 dentin sialophosphoprotein-related
9.48683 Ahg895977 RNA polymerase II transcription mediators
10.3923 Ahg471269 S-locus lectin protein kinase family protein
12.2474 Ahg316204
15.4272 Ahg470941 Presenilin-1
15.4919 Ahg479503 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
15.8745 Ahg493490 phytoene desaturase 3
17.1464 Ahg483451 RNA binding
18.7617 Ahg347147 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression