| Annotation |
|---|
| Description | jgi|Araly1|493490|fgenesh2_kg.7__2923__AT4G14210.1 |
| Sequence |
ACATATTTCG TAAGCAACAA AAGAGCTTGG TCTGAAAACC AACCAAGACC ATATGATGGG CACTCAAAGC CTCCATTTTG TTATCGGCTA CTTCCACTAG CTTCCTTCTT CTCTGCGTCT CCTCCTGGTT CTCTACTTTA CGATTGCTCA CTAGATTCAT TGAAGCAGTT GTGACTTAAG GTGGAGAAAT GGTTGTGTTT GGGAATGTTT CTGCGGCGAA TTTGCCTTAT CAAAACGGGT TTTTGGAGGC ACTTTCTTCA TCTGGAGGTA TTGAATTGAT GGGACACAGC TTTAGGGTTC CGACTTTTCA AGCACTTAAG ACAAGAACAA GGAGGAGAAG TAGTGCTGGT CCTTTGCAGG TGGTTTGTGT GGATATTCCA AGGCCAGAGC TAGAGAATAC TGTCAATTTC TTGGAAGCTG CTAGTTTATC TGCATCTTTC CGTAGTGCTC CTCGTCCTGC AAAGCCTTTA AAAGTTGTAA TTGCTGGTGC TGGATTGGCT GGATTGTCAA CTGCAAAGTA CCTGGCTGAT GCAGGCCACA AACCTCTGTT ACTTGAAGCA AGAGATGTTC TTGGTGGAAA GATAGCTGCA TGGAAGGATG AAGATGGGGA CTGGTATGAA ACTGGTTTAC ATATATTCTT CGGTGCTTAT CCAAATGTGC AGAACTTATT TGGAGAACTT GGGATCAATG ATCGGTTGCA GTGGAAGGAA CACTCCATGA TTTTCGCTAT GCCAAGTAAA CCTGGAGAGT TTAGTAGATT TGACTTCCCA GATGTCCTAC CAGCACCCTT AAACGGTATT TGGGCTATTT TGCGGAACAA CGAGATGCTG ACATGGCCAG AGAAAATAAA GTTTGCTATT GGACTTTTGC CAGCCATGGT CGGCGGCCAG GCTTATGTTG AAGCCCAAGA TGGTTTATCA GTCAAAGAAT GGATGGAAAA GCAGGGAGTA CCTGAGCGTG TGACTGACGA GGTGTTTATT GCCATGTCAA AGGCGCTAAA CTTTATCAAC CCTGATGAAC TGTCAATGCA ATGCATTTTG ATAGCTTTGA ACCGGTTTCT TCAGGAAAAA CATGGTTCCA AGATGGCATT CTTGGATGGT AATCCTCCGG AAAGGCTTTG TATGCCAATA GTGGATCATA TTCGATCACT AGGTGGGGAA GTGCAACTTA ATTCTAGGAT AAAGAAAATT GAGCTCAATA ACGATGGCAC GGTTAAGAGT TTCTTACTAA CTAACGGAAG CACTGTCGAA GGAGACGCTT ATGTGTTTGC CGCTCCAGTC GATATCCTGA AGCTCCTTTT ACCAGATCCC TGGAAAGAAA TACCGTACTT CAAGAAATTG GATAAATTAG TTGGAGTGCC AGTTATTAAT GTTCATATAT GGTTTGATCG AAAACTGAAG AACACATATG ATCACCTACT CTTTAGCAGA AGTAACCTTC TTAGCGTGTA TGCCGACATG TCCTTAACTT GTAAGGAATA TTACGATCCT AACCGGTCGA TGCTGGAGCT AGTATTTGCA CCAGCAGAGG AATGGATATC ACGAACTGAC TCTGACATCA TAGATGCAAC AATGAAAGAA CTTGAGAAAC TCTTCCCTGA TGAAATCTCA GCTGACCAAA GCAAAGCTAA AATTCTGAAG TACCATGTCG TTAAAACTCC AAGGTCTGTG TATAAGACCA TCCCAAACTG TGAACCATGT CGTCCTCTAC AGAGATCACC TATTCAAGGG TTCTACTTAG CTGGAGATTA CACAAAACAG AAGTACTTAG CTTCCATGGA AGGCGCGGTT CTCTCTGGCA AATTCTGCTC ACAGTCTATT GTGCAGGATT ACGAGCTACT GGCTGCATCT GGATCGAGAA AGTTATCGGA GGCAACAGTA TCATCATCAT CATCATGAGA GAGGACAAAG CTTAAAGATG ATTTCTTGTA AGCATTATTA TTTGTGTATA AATCTCACTG CAATCCAAAA TTGACCCTAC TCTCTTCAGT AAATGAATCT CACAAATTTG ACATCTCTTT AAAAGAGTAA TTACTGTCGA GCTTTTGTAA TCATAGTGAT TTATCATTAT GTCTCTCTCT TT |
| Length | 2082 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 13356919.. 13362361 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G14210.1 |
| Description | phytoene desaturase 3 |
| TAIR curator summary | Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid. |
| Alias | [PDE226][PDS][PDS3][PIGMENT DEFECTIVE 226][PHYTOENE DESATURASE][phytoene desaturase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7 |
Ahg949647 | crumpled leaf |
| 7.61577 |
Ahg924569 | PLAC8 family protein |
| 8 |
Ahg474208 | polymerase gamma 2 |
| 8.12404 |
Ahg482018 | FtsH extracellular protease family |
| 9.16515 |
Ahg494462 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| 11.0905 |
Ahg471868 | high chlorophyll fluorescence phenotype 173 |
| 11.3137 |
Ahg939856 | Protein of unknown function (DUF668) |
| 12.6491 |
Ahg476539 | signal peptide peptidase |
| 15.8745 |
Ahg486728 | Putative endonuclease or glycosyl hydrolase |
| 17.0294 |
Ahg926404 | Phosphoglucomutase/phosphomannomutase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|