| Annotation |
|---|
| Description | jgi|Araly1|347147|fgenesh1_pg.C_scaffold_5000539 |
| Sequence |
ATGGAACTTT CTGTTTCCTC TCCAAAGCAA AGTGTGTTAT CTCCACCTGA TTGTATGAGT GACCCTGAGG AGGAGCATGA GATCAGTGAG GAGGAGGATG ATGATCGCAA CCATAAGCAC CGTAGGAAAG AAGAGACGAG GGCTCAGTCT TTGGAACAAG ATTCTTCAGA TCAGGCTTTC TCACGGCCGT ACAGGAAAAA CTATAGACAT TATGAAAATG GCAATTCGTT TAGTGAAAAT GAAAAGCGGT CTTTTGGGAC AGGATCAGCG CAACGTGTAC AGTTTGATAA CCAAAGAATG AGGTCAAACC CAATGTTTTC AAGGGACTCT GGTCCTGGTA GAGGTAGAGG AAATTATGGT TCTTGGGCTC AGCGTGATTC CAGGTTTAAT CCTGTTGATC TCTCTTCTCA TATGGTTCAA GTCGGGTCTA TGGCCCAGGG CATGTTTGGA GGAAGGGGAC TAGCTGGTGT TTCAGCTGCT CAAAGTGCAC CATGGCCTCC TTTTGGAATG ATTCCTGGAA TTCCAAATGG TGGCTTGGAT GGTTTCCATC ACTTACAAGG ATCCCTAAGA CCGCCCTTAA ATGCTCCACT CAACATGGGT ATTCCTCGGC AGAGATGCAG AGACTTTGAG GAACGTGGTT TCTGCCTCAG AGGGGACATG TGTCCAATGG AGCATGGAAT GAATCGTATT GTTGTTGACG ATGTTCAGAG TCTATCACAG TTTAACCTTC CCGTTTCAGT CCCTGGTGCA CCTCATCTGG CAGCTTCTTC TAAACCAGTG CCCGCACAGT TTGGGGGTGC CAATTTCATG AATCCTAAAG GAGCTCATGG GAGGACAAAC GAGGGCGGAA TGGCTGTTGA TGGTTTGGGT TATGGGGATG CATATCCTAG TGCTGGTGGA ACTGACTTTT ACGATCCTGA TCAACCTTTG TGGAATAATA GTACTGGTGA AACTTCAGGT GCAATATCGA CACTCAATTC TCATGGGGTT GATGAGAATG TAGCTCCACT GGATGACAGT AACCAAGACG GCGCTGAAAA TGGGTGTGGT ATTCGAGACT CTAGAAGCAT AAGTCAATCA GTTTGGGGAA GAATGCGTGG TTCTAATAGT CAAGCAAATT CCAAAGAGAA AGCTGATGCA GTATTAAATT CATCAGCTGG TCCTGAAGAT CAATTGAAGG AGGTCTCAGT TAATTCATCT CGACACGGTA AACAAAACCA TGTTGGTGAA AGTGTCGCAA AAGTTGTTGA TTCATCGAAT ATTTCAAATG ATATGATGAA CAATACAAGG AAACCAACTC AAAAGGCAAT GCGGACTCTA TTTGTGAATA ATGTTCCCCA CGAGAGCAAC AGAAGGGATC TCATTCTTGC TCATTTTCAG AAATTTGGGA AAGTTATTGA CATTCACATC CCAGTAAATA GTGAGCGAGC ATTTGTGCAG TTCTCAAAAC GTGAAGAGGC TGAATCTGCC CTCAGGGCAC CTGATGCTGT GATGGGTAAC CGCTTTATCA AACTTTGGTG GGCAAATAGA GATAGTATAC CTGATAATGG CCTGTCCACT GGCAATGGTG CTTCTATGAA GGGTCGTGGT ATGACTGCTT CTGGACCGCA GAACCAATTT CCTATTGCTG CAGCATCGAA AAGCAACCAT GTATCTTCCA TTGCTAAGGT CCCTGCATTC CACACTGGTG GAGCTCCATC CTCTTCTGAA CAGCCTAAGC CTGTGGTGGC CACTAGTGGT TCCAAGGTTA CGCCGCTTCA GCAGAAAAAA GCAGATACTC TTGAGCGGTT GAAGGAGACT CTTCGTAAAA AACAGGAAAT GCTGGAGCAG AAGCGTAACG AGTACCGGAA AAAATTGGCG ACACTTGAAA AACAATCTCT GGAAAGTTTA GCAGAAGTAG AAGTAAAAGG ATTGAATCTC GAAAGTGTCT TTTGGAAATT TAAGAAGTGT AAAATGGGTA CGGTTGTCAA GGGCGAGGAA GTAGATGAGC CAGACGCTAA GCGTGTTAAA GTAGACACAG CCTCTGATTC GGGAGCTGCA ATTGCATCAC CAAAACCAGA GTCATCGACA GATAAGAAAG TGCCTATCCA GAAACCACTT TCCAGCGCCA AACTAAGCAC AGAAATGCCA TCACCCGATT CAAAAAACTT GAAGCAAAGA CCATATACGT TTACCACAAG TTTGAACACT CCTATGGTAA ATAGGTATAA GTTGGACAAC CGCACCACGA CCATCAAAGT GGTTCCCCCT TTGCCAACTG GCTTAGCTGA TATTGCTGTC TTAAAGGAAC ATTTTTCTTC TTACGGCGAA GTCTCAAAAG TGGAACTGCA AGACAATGCG TCGATTGGTA GTGGCAAGGA CCATGAAACA CAGAACGAAA ACCGTGCAGC TTGTGTCACA TTTGTGAAAC GCAGCGCAGC AGAGAAAGCG TTTGCTAATG CAAAGTGTTG GCAAGAACAC ACGTTGCAGC TCGTGTGGGT AACACGTCAA AGCAACAAAG AGAGCAATAA TAACAATAAC AATAGTAGTA GTCTCTCTGT TTCTCATGAC CACCTTAGCA GCAAAAACAA GTGTGCTTCT GTCTCTAATG ACCCAAAACC AGCAGTTGAA GTCAAGGCCT CCTCTACAGA AGAACCAGAG ACTACAAATG TTTCTGGAGA CAACGACAGT ACTTTGGATA AAAAAGAGAC CAAAGAAAGC GACAATGATA ACAATAAAAG TAACCACGAG TCCATGGAAG GAGCTTCTGA TGCGATTGCA ACTTCAGGAA CTGATGAAGA ACAGTCTGAA CAAATTCATC AGTGA |
| Length | 2805 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 3750903.. 3754558 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G27700.1 |
| Description | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 3.4641 |
Ahg482562 | RNA helicase family protein |
| 9.48683 |
Ahg488990 | Phosphoinositide phosphatase family protein |
| 15.1658 |
Ahg476480 | Protein kinase superfamily protein |
| 18.1108 |
Ahg311407 | Beige/BEACH domain ;WD domain, G-beta repeat protein |
| 18.7617 |
Ahg486728 | Putative endonuclease or glycosyl hydrolase |
| 18.9737 |
Ahg941044 | Bromodomain transcription factor |
| 19.7484 |
Ahg907544 | mitogen-activated protein kinase homolog 2 |
| 20.1494 |
Ahg930357 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
| 27.6586 |
Ahg919097 | Leucine-rich repeat protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|