| Annotation |
|---|
| Description | jgi|Araly1|486898|fgenesh2_kg.6__32__AT5G01710.1 |
| Sequence |
TTTTCCGATT CCCCTCTATC TCTCTTTCTT CTTCATTTTT TTGCTCACTC CAGATTCCAT GTCTCTATCT CTTTCCTCCG CCGTATAGCC GCCGGAAAAA CTCCCCTTGT TTTTTTTCCG AAAACCGTGG CGAACTATGC GCTTCTTTTG CCGTTATCCT CCAACTACTT GTCCGATCTG CAATTCGTAT TGTCTATTCC CAACCCTAAT CGGAGCTAAT CACACCTCTG CTAGGTTCTC TTCTCGTTAG TCTTTGTTCC ACCTCCTCAG ATTTAGGGTT GATTTAAGTC TAAGAAACAA ACCTACCGAG AGCTATTCTT TCGTTCTTTA TTCTCTCTGT CTTGTAAAGC AGTTTTAGCA GTGAGATACA TATATACAAT GGAGACTTCC ATGGGGAAAC CCAGCTTCTT GCGGAATATT ATGGTTCGCG TGCTTCTCTT TGGTGTTCTT ATCATCGTTG TCAGATTTGC TTATGTTGTC ACCATCACCG GTGAATCATG CAATCGCGGC GACTTCTGCT TCTTCTCTCT CCCTGAGAAT CTCAACTTTG TCATCTCCGG TCCTGGCTCC GGCGCTTCTG CTATCGACGC CATCAGATCT ACTTCTCCAG GCGATGATCT GTATACCAGC AGGGATTGGA TCAAAGCCGT TCAGTTTTAC TCCTCCATCT TTCAGGATCT GATCGCCGAC GGTTATCTCT CCCCGGAATC GAAGACGCTT TGTGTGGAAA CGGCGATTGG ACAAGAGGTT CACTCACTCA GAGAGATTGG GGTCAAGAAC TCCGTCGGGA TCTCTAAGAA GGCTTTTAGG CCGTTGGTGG TCAGAGGCGA GGGACATGCT ATTCCCTTCG AGGATAACGC TTTCGATTTT GTCTTCTCCG GTGGTGGTCG CCTCGGGAAG TCGTTGAAGC AGTTGGAATT CGCCGACGAG ATTACTCGAA CACTGAAACC CCAAGGGTTT GCGGTGGTTC ATGTTGGGGC TACAGATACG TACAGTTTCA ATTCATTCCT TGATTTGTTT AATTCTTGCA GATTGGTGAA GATGCGTGAT ATTGATGGTT TTGATTCTTC AATGCCTCAT ATCAGAGAAT TCGTTATTCA AAAATACTCA GATATTGATG GTCATCATCA CCGGAAGAAT TCCGGTGATG ATTCTGGTGG AAAGTGCTGG ATTCCCGGTT ACAAAAGAGA TTTGATTCGG GATGCAGAGC CACTGATTCA AGAGGAGCCT CTTAAGCCAT GGATTACCCT TAAGAGGAAC ATTAAGAATA TTAAATATGT GCCTTCTATG GTAGATATAC GTTTCAAGAG TAGATATGTA TACGTTGATG TTGGTTCTCG AAGTTACGGG TCCAGTATTG GGAGTTGGTT CAAGAAAGAG TACCCTAAGC AGAACAAAAC TTTCGATGTT TTCGCCATTG AGGCCGACAA AGCCTTTCAT GAAGAGTATA AGATTAAGAA AAAGGTGAAC CTATTGCCAT ACGCAGCATG GGTGAGGAAC GAGACATTAT CATTTGAGAT AAATCACGAT CCGGGAAAGG AAGCGGAAGC CAAAGCAAAG GGCAGGGGAA TGGGCAGAAT CCAGCCGGTT AAAAAGTCTT CCTCCAGTGA CTTAGCTGGA GAGGTCAATT TGATTCAAGG GTTTGATTTC GCTGACTGGT TGAAGAAGAG TGTGAGGGAG AGGGACTTTG TTGTGATGAA GATGGATGTG GAAGGAACCG AATTCGATCT GATCCCGAGG CTAATCAAGA CAGGAGCGAT TTGTCTAATC GACGAGTTGT TCCTTGAATG CCATTACAAC AGGTGGCAGA GATGTTGTCC TGGTCAAAGG AGCCAAAAGT ACAACAAGAC TTATAACCAA TGCTTAGAGC TCTTCACTTC GCTCAGACAA AGAGGGGTGC TTGTCCATCA GTGGTGGTAA TGGTTAGGAT GCTGCATAAT CTCCTTCTTC TTCTTCTTCT TCTATGCAAA ATGTACTTTC TTCTTCTAGA ATATAAAACG GATATTGTAG GTTTCTATTA AAAATACGTT GTCTATGCTG AAATTCCCTT TACTGTAAGA AAAAAGAAGT TTAGCTTGAA ATGAAATTTG AGTTTCTTTT ACTCTCGCAA CTG |
| Length | 2113 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 142137.. 144361 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G01712.1 |
| Description | conserved peptide upstream open reading frame 48 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF48 represents a conserved upstream opening reading frame relative to major ORF AT5G01710.1 |
| Alias | [CPuORF48][conserved peptide upstream open reading frame 48] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg488471 | HEAT repeat-containing protein |
| 6 |
Ahg495420 | ARM repeat superfamily protein |
| 6.63325 |
Ahg476480 | Protein kinase superfamily protein |
| 8.3666 |
Ahg919597 | fatty acyl-ACP thioesterases B |
| 10 |
Ahg491382 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| 10.0995 |
Ahg487745 | NAC domain containing protein 82 |
| 12.3288 |
Ahg490142 | glucan synthase-like 1 |
| 15.5563 |
Ahg482750 | ARF-GAP domain 7 |
| 15.8114 |
Ahg943625 | glycosyl transferase family 1 protein |
| 17.2916 |
Ahg484555 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|