Detail



ID : Ahg487745

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487745|fgenesh2_kg.6__879__AT5G09330.2
Sequence
AGTTCTGGCT TATCCTTCAC GCCACTCTCT AAATCCCTCT CGCTCTCCTC CCCCTTTGCG ACGATCGTCC TTTCCCACTG TCGAGTTTTT CTCTCTCTCT CAATAGCAGG CTTTACGTTG CACACCAGAT GTCTGTTGAT CTCTGCAAGA AGAACCCATC TTTTCTTTGG TGTGACTGTG GTTATATGAG CAGGGGGAGG TTGTGGTGTT TTCAGATAAT CCTCTTCAGG CACTGGACTT GACTTGCCTT CACTTCGTCG ACTTCTCTCT TCTTTTCTTT TTTTCTGTTT ACTTTGATCA AAGGGTATTC GCTTCTGCTG CTCCTGTTTA CTGTGAATTT GAAGACTAAG TTTTCTGTGC AAAACTCTCA CTTTACTGGT GAGGAGTTTA CGGAAGATTG TTCAAAGTTT TCCCCTTTGG ATTCGCCAAT GGGGAAAACT CAACTCGCTC CTGGATTTCG TTTCCATCCC ACTGATGTTG AACTCGTGAG ATATTACTTG AAGAGGAAAG TACTGGGGAA AAAGCTCCTT GTCGATGCTA TTGCTGAAGT TGACATTTAC AAGTTTGAAC CCCCTGATTT ACCTGATATG TCCTTTATAA GAAGTGGGGA TCTTAAGTGG CACTTCTTCT GCCCGAGGGA AAAGAAGTAT GCTAGTGGGG TTAGGGCAAA CCGTGCAACT GAGTGTGGTT ACTGGAAGAC CACAGGGAAG GAGAGACCAG TTCTGTGCAA TTCTGAAGTT GTGGGAAAGA TAAAAACTCT GGTTTATCAC TTTGGTAAGT CGCCTCGTGG GGAGCGGACT GATTGGGTTA TGCATGAATA TAGGCTTGAA GACAAGGTAC TGACGCAGAT GAATGTTCCT CAGGATACTT ATGTGGTGTG TGTTCTGTTC AAGAAAGATG GCCCTGGACC TAGAAATGGA GCTCAATATG GAGCTCCATT TAGGGAAGAG GACTGGAGTG ATGAGGAACA ACGTACTGAT GTTCCTTCTA CTAGTAATCC CACAAACCTT CTTGAGCCTA GCAAAGAAAC CACTCTGGCT TTGACTGCCC CAGATGACTC CAATAAGGAT TGTTTTGGTG GCATGATATC AGAATCATGC GTCTCCGATT TCCTACCAGC TACAACTAAT ACCACCAGCA AGCTTCCACA TCCAAGTGAT GCAGCTAACA CTCCTATGTC TACTGCACCT CTGGCAGAGA CCCTTCAGAC CCCCAACAAT GATGACTTAT ATTCAATGTT GGATCTATTT GATGATGACG AAGAATTCTT AGGGTTCAAC AATAATGAGG TAAGACATGA TCCCGGTGTC TCAGCTCCAG TTTGCTTAGA AGAAGAAGGC ATTTTCAACG GATTACCAGA GTTGAGCAAC ATGCCAAGGA CGGCCTCTTA CGACCTAATT GAAAACTCGG AGTTATACCT AGAGCTACAA GATCTCACTG CTCCATTAAA TCCTCATATT GGGCTACAAG ACCTAAGTGC TCCATTGAAT CCTCAAACTG GGATGCAAGA CCTCACTGCC CCATTATATC CTCCAACTGG GAATCTCAAT GACCCGAGAA GCTCCTCCTA TCTGTATAAT CAAGGCCACT TTGACTTCTC TGCTGCTAAT GATGATGATC CTTATGGCTT TTCTGCTTCC GTGGGACATA GACCAAAAAT GTGAAACGAG GAAGAGAAGA GTAGCAGGAT TTACAAAACA ACAACAGATG CAAATCAGAC AGAAAAGAAG GAGGAGAACC ATTGTTTCTT GTCTTTGAAT TTTTTAATTT GTCGAAACTT CCCTATCAAC TTTCTCTGCT TCATCCTTAG ATTCTCGTAC TTGTTTGAAA TATTCTCAAC ATTTATTCTT GTCTCTATTT TGCTATGAAT TAT 
Length1873
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3566254.. 3569012
Download Sequence
A.thaliana
AGI-codeAT5G09330.1
DescriptionNAC domain containing protein 82
TAIR curator summary
Alias[ANAC082][NAC082][VNI1][NAC domain containing protein 82][VND-interacting 1]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg482666 glucan synthase-like 8
4.69042 Ahg486936 HEAT repeat-containing protein
5.83095 Ahg477280 RHO guanyl-nucleotide exchange factor 12
6 Ahg489225 phosphate deficiency response 2
9.16515 Ahg488158 no exine formation 1
10.0995 Ahg486898 conserved peptide upstream open reading frame 48
11.225 Ahg483451 RNA binding
13.2665 Ahg333455 nitroreductase family protein
21 Ahg476765 Prolyl oligopeptidase family protein
21.6333 Ahg899931 casein lytic proteinase B4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression