| Annotation |
|---|
| Description | jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1 |
| Sequence |
TGGTATAATT TTCATCTTCT TTGACTCTAA GAAAAACCAA ACTCTCATGT CCATAAAAGA AAATCTCTAA ACAAGAACTC TTCAAAGTAT ATCTATGGGC ACTGCAAGAT CCATTGTCTT ACTCTCACTC TTATTCAATC TTTTCCTGTT TTTGAGCGTC CATGTTGGGG CTCAGAGAAC AACAACAGAT TTTACTTTCC GAGGTTTTCT TGGAAACCAA TCAAAGATTC GGATTGAAGG AGCCGCGATG ATCAAACCCG AGGGACTATT GAGGCTCACT GATCGGAAGT CAAACGTTAC CGGTACGGCT TTCTACCACA AACCGGTGAG ATTGCTGGAG ACTAGTAGAA ATTCCACAAA CGTCAGAGTT CGTTCCTTTA GCACTTCTTT CATCTTTGTC ATAATCCCTT CAAGCTCAAG CAATAAAGGT TTTGGATTCA CATTCACACT ATCTCCAACC CCTTATCGTC TCAATGCTGG ATCCGCACAG TACTTGGGAG TTTTCAACAA AGAGAACAAT GGGGATCCTA GGAATCACGT TTTCGCAGTG GAATTCGACA CGGTGCAAGG ATCCAGAGAC GACAACACCG ACAGAATAGG AAACGACATC GGTCTGAATT ACAACAGTCG TACTTCGGAT CTACAAGAAC CAGTCGTGTA TTACAACAAT GATGATCCTA ACAAAAAAGA AGATTTCCAG CTTGAGAGTG GCAATCCGAT TCAAGCCCTT TTGGAGTATG ATGGACCAAC ACAAATGCTA AACGTCACCG TTTATCCGGC GAGATTGGGG TTTAAACCCA CAAAGCCTTT GATCTCTCAA CATGTTCCAA AACTGTTAGA GATTGTGCAA CAAGAAATGT ATGTCGGATT CACTGCGTCG ACGGGGAAAG GTCAGTCGAG TGCTCATTAC GTAATGGGTT GGAGTTTCTC AAGCGGCGGA GAACGTCCAA TTGCAGACGT CCTCGATCTC TCGGAGCTTC CTCCTCCGCC GCCGAATAAG GCGAAGAAAG AAGGTTTAAA TTCTCAAGTC ATTGTTATGA TCGTGTCTTT ATCGGCCGTA ATGCTGGTCA TGCTTGTGTT GCTCTTCTTC TTCGTCATGT ACAAAAAGAG ATTGGGACAA GAAGAGACTC TTGAAGACTG GGAAATCGAT CATCCTCGCA GATTGAGATA CAGAGATCTC TACGTAGCCA CGGATGGATT CAAGAAGACG GGGATCATCG GAACCGGAGG ATTTGGAACC GTTTTCAAAG GAAAACTCCC AAATTCGGAT CCCATCGCTG TGAAGAAGAT AATTCCCAGT AGCAGGCAAG GTGTTCGAGA ATTTGTCGCA GAGATCGAGA GTTTGGGGAA ATTAAGGCAT AAGAATCTGG TGAACCTCCA AGGATGGTGC AAACACAAAA ACGATCTCTT GTTGATTTAC GATTATATCC CCAACGGAAG CTTAGACTCT CTGCTCTACA CTGTACCGAG AAGAAGCGGC GCCGTGTTGT CGTGGAACGC GCGTTTCCAG ATCGCTGAAG GAATCGCGTC TGGTTTGTTG TATCTTCACG AAGAATGGGA AAAGATTGTG ATTCACAGAG ACGTGAAACC TAGCAACGTT TTGATTGATT CCAAGATGAA CCCTAGATTG GGAGATTTTG GACTCGCGAG GCTTTACGAA CGCGGAACGC TATCGCAGAC AACAGCACTC GTTGGAACCA TTGGGTACAT GGCGCCAGAG CTCTCCCGAA ACGGCAACCC CTCATCTGCG TCTGATGTTT TCGCGTTTGG CGTTTTGCTG TTAGAAATCG TCTCCGGGAG AAAACCGACG GATTCCTGTA GCTTCTTCTT AGTCGATTGG GTTATGGAGC TACAAGCGAG CGGTGAGATC CTCAGCGCGA TCGATCCGAG ACTCGGATCT GGTTACGACG AAGGAGAGGC AAGGCTTGCT CTTGCCGTGG GTTTGCTCTG TTGCCACCAA AAACCGACGT CTCGGCCGCC GATGAGAATG GTGCTCAGGT ACCTGAACAG AGACGAGGAT GTTCCTGAGA TTGACGATGA GTGGGGATAT TCAAAGTCTT CAAGAAGCAA ATTCGGATCC AATTTTGTAG GATATGATTC ATTGAGCTCA ATCGCCAGAG TTTCTTCGAC TTCTCGTATC AGTCAGTAGT GGATAATGCA TGTTCACTTT CTTGCTTCGA ATTGGTCAAA TCTTTTAGCT TTCAAAAGAC CAAAACATAA GTTAACTATT AGATATGGAC AATAGTATAA AATAAATTTT TGTGACGTTA CACAGATTAT TCA |
| Length | 2283 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 196041.. 198640 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G01540.1 |
| Description | lectin receptor kinase a4.1 |
| TAIR curator summary | Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. |
| Alias | [LecRK-VI.2][LECRKA4.1][L-type lectin receptor kinase-VI.2][lectin receptor kinase a4.1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.975 |
Ahg478996 | NAC domain containing protein 3 |
| 24.4131 |
Ahg927205 | sulfate transporter 1;2 |
| 25.02 |
Ahg895520 | cysteine-rich RLK (RECEPTOR-like protein kinase) 36 |
| 40.8901 |
Ahg348825 | Insulinase (Peptidase family M16) family protein |
| 41.8091 |
Ahg485516 | conserved peptide upstream open reading frame 44 |
| 44 |
Ahg494872 | nitrile specifier protein 5 |
| 44.0227 |
Ahg487501 | polygalacturonase inhibiting protein 1 |
| 45.4973 |
Ahg356368 | Leucine-rich receptor-like protein kinase family protein |
| 46.1302 |
Ahg941635 | sucrose synthase 1 |
| 47.697 |
Ahg340533 | cationic amino acid transporter 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|