| Annotation |
|---|
| Description | jgi|Araly1|487501|fgenesh2_kg.6__635__AT5G06860.1 |
| Sequence |
ATGGATAAGA AAATGACAGT ACTTTCCTCT CTCTTGTTCT TGTTCACATT CCTCACGATC TCTTTGTCTA AAGATCTTTG TAACCAAAAT GACAAAAACA CCCTTCTAAA GATCAAGAAA TCCCTAAACA ACCCTTACCA CCTGGCTTCG TGGCACCCCG AGACCGACTG TTGCTCATGG TACTGCCTCG AGTGCGGCGA CGCCACCGTT AACCACCGCG TCACCGCCCT AACTATATTC TCCGGCCAGA TCTCTGGTCA GATCCCTCCT GAAGTCGGTG ACTTGCCGTA TCTTGAAACC CTTGTCTTCC GCAAACTCTC TAACCTCACC GGTCAAATCC AACCCACCAT CGCTAAACTC AAGAACCTCA AGTACCTCAG GCTCAGTTGG ACAAATCTGA CGGGTCCAAT TCCTGATTTT CTAAGCCAGC TCAAGAATCT CGAGTTCTTA GAACTTTCCT TCAATGATCT CTCTGGTTCC ATACCAAGTT CACTCTCTAC GTTACCTAAT ATCCTGGCCC TTGAACTTAG CAGGAACAAA CTTACAGGTT CAATACCAGA GTCATTTGGG TCGTTTCCAG GAACAGTCCC TGACCTTCGC CTATCACACA ACCAGCTCTC CGGTCCGATA CCCAAATCAC TAGGCAACCT CGACTTTAAC CGGATCGATT TCTCCCGGAA CAAGCTCGAA GGTGATGCTT CGATGTTGTT TGGTGCCAAC AAAACGACAT GGTCCATTGA TTTATCAAGA AACATGTTCA GCTTCGATAT CTCAAAGGTT GAGATCCCTA AGGCACTTGG TATCTTGGAC TTAAACCACA ATGGGATCAC AGGGAATATA CCGGTTCAGT GGACTGAAAC TCCTCTTCAA TTCTTCAATG TTAGCTACAA TAAATTGTGT GGACATATCC CAACAGGAGG GAAACTTCAG ACATTTGATT CTTATTCCTA TTTCCATAAC AAGTGTTTGT GTGGTGCTCC TCTTGAAATT TGCAAGTGAA CCAAGCTTGT CTCTAGGATT TCGAAAAAAT CTATTTGAGT CAATATAGAC AAATATGTAA TATTATTCGG ATTGATTAAT AAAACATGAA CCAAAACTCG CCTTTGATGA ATTCATAGCA CATTTTCAAA GTGTTTGATT TGATGGATT |
| Length | 1149 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2508325.. 2509544 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06860.1 |
| Description | polygalacturonase inhibiting protein 1 |
| TAIR curator summary | Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection. |
| Alias | [ATPGIP1][PGIP1][POLYGALACTURONASE INHIBITING PROTEIN 1][polygalacturonase inhibiting protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg346793 | ribonuclease 1 |
| 6.9282 |
Ahg951254 | EXORDIUM like 2 |
| 12.9615 |
Ahg926884 | pathogenesis-related gene 5 |
| 14.4222 |
Ahg476851 | extensin 4 |
| 14.6969 |
Ahg494080 | HXXXD-type acyl-transferase family protein |
| 15.5885 |
Ahg942310 | Hypoxia-responsive family protein |
| 16 |
Ahg470966 | ERD (early response to dehydration) six-like 1 |
| 16.9706 |
Ahg494895 | Glutamate receptor family protein |
| 17.4642 |
Ahg941635 | sucrose synthase 1 |
| 17.8885 |
Ahg491262 | Cystathionine beta-synthase (CBS) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|