Detail



ID : Ahg935712

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935712|scaffold_403700.1
Sequence
GAGCGAGAGA GAGATAGAGA ATGAAGTCTT TCGCGGCTAA GGCAGAAGAG GGAGTTAAAG GGATAGACGG AAAGCCGTCA GTAGGTCCGG TGTACCGGAA TCTCCTGTCG GAAAAAGGTT TTCCTCCGAT TGATTCTGAG ATCACCACTG CTTGGGACAT TTTCAGTAAA TCAGTGGAGA AATTCCCTGA CAACAATATG CTTGGATGGC GTCGAACTGT TGATGAGAAG GTGGGACCGT ATATGTGGAA AACGTACAAG GAAGTATACG AAGAAGTTTT GCAGATCGGT TCTGCACTAC GAGCCGTCGG AGCTGAACCT GGGTCTCGAG TGGGGATCTA CGGAATTAAT TGTCCGCAGT GGATCATAGC AATGGAGGCT TGTGCAGCTC ACACTCTAAT ATGTGTACCT CTATATGATA CATTGGGTTC AGGAGCAGTC GATTACATTG TAGAGCATGC GGAAATCGAC TTTGTGTTTG TCCAAGACAC CAAAATTAAA GGACTCCTTG AGCCAGATTG CAAATGTGCT AAACGGCTAA AAGCTATAGT TTCCTTCACT AACGTGAGTG CCGAGCTTAG CCACAAGGCT TCAGAGATTG GAGTCAAAAC ATACTCATGG ATCGATTTTC TACATATGGG ACGTGAGAAA CCAGAAGAGA CGAACCCGCC TAAGTCGTTT AACATATGCA CCATAATGTA CACGAGTGGC ACGAGCGGTG ATCCTAAAGG TGTGGTTTTG ACTCACCAAG CGGTGGCGAC TTTTGTTGTT GGGATGGATC TCTACATGGA CCAGTTCGAA GATAAGATGA CACATGACGA TGTGTATCTC TCCTTCTTGC CGTTGGCTCA TATTCTTGAC CGTATGAATG AGGAGTACTT TTTCCGCAAA GGCGCTTCCG TCGGCTATTA CCATGGAGAT TTGAATGTGT TACGTGATGA CATTCAGGAA TTGAAACCGA CTTATCTAGC CGGAGTACCA AGAGTGTTTG AGAGAATCCA TGAGGGGATT CAAAAGGCTC TTCAAGAACT TAATCCAAGA AGGAGACTCA TCTTCAATGC TCTCTACAAA CACAAGCTTG CATGGATGAA TCGTGGATAC TCTCATAGTA AAGCTTCACC CATGGCTGAT TTCATTGCTT TCAGAAAGAT TAGGGACAAA TTGGGAGGTC GGATCCGGTT GCTAGTATCT GGAGGGGCAC CTTTGAGCCC TGAGATTGAA GAGTTCTTGA GAGTTACTTG TTGTTGCTTT GTCGTCCAAG GCTACGGCCT AACGGAGACG CTTGGAGGTA CGGCTTTGGG TTTCCCGGAT GAGATGTGTA TGCTAGGAAC AGTCGGTATT CCGGCGGTTT ACAACGAGAT ACGACTTGAG GAGGTGGCTG AAATGGGCTA TGACCCACTC GGGGAAAATC CAGCAGGGGA GATCTGTATA AGAGGACAAT GCATGTTTTC TGGGTATTAC AAGAACCCTG AACTCACTGA AGAAGTCATA AAAGATGGAT GGTTCCACAC AGGAGATATA GGTGAGATTC TTCCAAACGG AGTACTCAAG ATCATCGATC GTAAGAAGAA TCTGATCAAA CTCTCTCAAG GAGAATATGT TGCTCTCGAG CATTTGGAAA ACATCTTCGG CCAAAACTCT GTTGTCCAAG ATATATGGGT TTACGGAGAC AGCTTCAAAT CTATGCTTGT CGCCGTGGTT GTTCCCAACC CGGAAACCGT TAACCGGTGG GCTAAAGATC TCGGTTTTAC TAAACCACTC GAAGAACTCT GTTCTTTCCC GGAGCTTAAA GAACACATCA TTTCAGAACT GAAGTCCACG GCAGAGAAGA ACAAGCTAAG AAAGTTTGAG TACATCAAAG CGGTGGCGGT GGAGACAAAA CCTTTCGACG TAGAGAGAGA CTTAGTGACT GCGACACTCA AGAATCGGAG GAACAATCTT CTCAAATATT ATCAGGTACA AATCGACGAA ATGTACCGCA AATTGGCGTC AAAGAAAATC TGAAAGTGCT GCAATGATGT GTG 
Length2023
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21772078.. 21776054
Download Sequence
A.thaliana
AGI-codeAT2G47240.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summaryEncodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis
Alias[CER8][LACS1][ECERIFERUM 8][LONG-CHAIN ACYL-COA SYNTHASE 1]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg491495 TPX2 (targeting protein for Xklp2) protein family
12.6491 Ahg478170 Leucine-rich repeat protein kinase family protein
15.0333 Ahg490244 GRR1-like protein 1
17.72 Ahg485285 IQ-domain 21
20.2731 Ahg470295 FZO-like
20.9284 Ahg470113 Sec14p-like phosphatidylinositol transfer family protein
22.2486 Ahg486953 like AUXIN RESISTANT 1
22.891 Ahg481979 winged-helix DNA-binding transcription factor family protein
24.5561 Ahg472226 tubulin beta-5 chain
25.3377 Ahg495241 subtilase 1.3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression