| Annotation |
|---|
| Description | jgi|Araly1|487003|fgenesh2_kg.6__137__AT5G02250.1 |
| Sequence |
AGAATTTCTC GTTTCTATCA CCCGCTTCAT TTGCCTTTCT ATCGCCACAA GAACACACAG AGAGAGCGAT TTGCCACTTC CGATATCGTT CGGATTTTGC TTCTTCATCT GAAGCTACGA TGATTTCGGT TAGAGCAATC AATGGTTGCT CCATCATTCG CACCGCCACT TCCGCCGGCG GCCCTCCCGT CTCTCTATTT CGCCACCGTA TTCAGCGCCT TAGAGCTTCT CATCTCCGTG AATTCTCGAA ATTAGGTTTA AATTTTCCAC TACTCCGGTC GAATAGGCGA TTTCTCGGAA ATAATGATGC TCCGAGCTGT TCGTCTTGCA TTCATAGTCT GGTCGAAAGT GTTTCCGAAG AGCTCGAATC CATCAGCAGA CGCAAGGGAA GCCGAATCCG AGTTCGTGCT AGCGTGAAGG TGAAATTAAC AAGCTACGGA GAGGTTCTGG AGGATAAGCT AGTAAACCAG GAACTGGAGG CGGGTTTGCT TCTGGAGTTT AAGAAGGACG CAGAGAGAGT ATTGTTGGCA GTTGTTCATA GACGTGATGG CAAGAAGAAC TGGATGGTCT TTGATCAGAA TGGTGTTACT TGTTCCATCA AACCACAGCA AATTACGTAC ATCGTCCCAG GTGTTTATAA TTTTGATCAT ACAGGACTTA CTGATTTTCT CCAGAGGGCA CAGGATAACT TGGATCCCCA ACTGCTTGAG TTTGCTTGGA TCGAGTTACT TGAGAAGAAC AAACCTGTGA CGCCAGAAGA GTTAGCAGAG ATGATATATG GTCGAGCAGA TCCTCTTGAA AGCTATTGTG CTCATTTTTT GCTATCACAA GACGAGATAT ACTTTTCTGT CTTGGAGTCA AAAGGTTCTC GATCAATATA TAGCCCCCGG ACTACTGAAC AGGTGGAAGA GCTTTTACGA AGGCAACGCG TGAAGGAGGC AGAAGAGAAA GAGTTTCAGG AGTTTATTCA ATTGCTGAAG TCTGCCAAGA AGGCGCCTAG TCACGCCAAG CCCCCCAAAT CTTCATGGCT AGCTGATGAT AAAGTCCAAG ATAGAATTGG CTCACTTGAA GCTTATGCCA TTGATGCATG GGCAAGCACT GACCAGCAGA AATTGGCTGG AACGATCTTA AAATCCATGG GGTTACAGAA AACGTCTGTA TCAGCACTAA ACCTTCTCAT AGATATTGGA TATTTTCCTG TACATGTCAA TCTTGAACTG CTTAAGCTGA ATCTTCCAAC CCACCACTCA GAAGCTATCA CTGAAGCTGC TGAAGTTCTT CTTTCAGAAT CATCTGATAT TGATGCGGTT AGGAGGATTG ATCTAACACA CTTGAAGGTT TATGCAATTG ATGTTGATGA GGCTGATGAG CTTGATGATG CCCTCAGTGC AACGAGATTG CAGGATGGAC GGATAAAGAT CTGGATACAT GTTGCTGATC CTGCTAGATA TGTTACACCT GGGAGTAAAG TGGACAGAGA GGCAAGGAGA AGGGGAACTT CTGTCTTTCT GCCTACGGCT ACTTATCCAA TGTTTCCAGA AAAACTTGCC ATGGAAGGAA TGAGTTTAAG ACAAGGAGAA AACTGCAATG CTGTCTCTGT GTCTGTTGTC CTGCGTTCTG ATGGCTGTAT TGCAGACTAT TCAGTAGAGA ATTCAATCAT CAGACCAACC TATATGTTGA CATATGAAAG TGCTTCTGAG CTGCTTCACT TGAACCTAGA AGAAGAAGCT GAACTGAAAT TGCTGTCTGA GGCAGCTTTC ATTCGCTCTC AATGGCGCCG TGAACAGGGT GCAGTGGACA CAACTACACT AGAAACTCGT ATCAAAGTGG TGAATCCTGA GGATCCAGAG CCTTTGATAA ATCTCTATGT AGAAAATCAG GCAGATCTAG CGATGAGACT TGTCTTTGAA ATGATGATTC TTTGTGGGGA GGTTGTAGCA ACGTTTGGGT CTCAGCATAA TATTCCATTG CCATATAGAG GACAGCCTCA GTCAAATATT GATGTATCTG CATTTGCACA TCTTCCAGAA GGACCCGTAC GTTCGTCATC CATTGTCAAA GTAATGCGTG CTGCAGAAAT GAATTTCAGA TGTCCTGTTC GACATGGAGT GCTTGGAATT CCTGGTTACG TTCAGTTCAC ATCTCCCATT CGTCGTTACA TGGATCTTAC TGCACACTAT CAGATTAAAG CTTTTCTTCG AGGAGGTGAC AATTTTCCAT TCTCGGCTGG TGAGTTAGAA GGTATAGCAG CATCCGTAAA CATGCAAAGC AAGGTGGTGA GAAAGCTCTC AAACACCGGT CTCCGCTATT GGGTAATAGA GTTTCTCAGA AGACAAGAAA AGGGTAAAAA ATACACCGCA TTGATCTTGA GATTTGTCAA AGACCGGATC GCATCGCTTT TGTTGGTTGA GGTGGGTTTT CAAGCAACGG CGTGGGTGTC AGAAGGAAAA CAAGTGGGAG ATGAAATCGA AGTTCGAGTA GAAGAAGCTC ATCCCCGCGA CGATCTTATT CTCTTCAAAG AGGTTATCTA GAGAATTAAA AACACATAGT TCAGGAAAAT TCATCAAAAC CGGTTTCTCT AAACATGGAG ATGCCTGGAA CTGATAGAAA GCTTGTGTTT ACAAAAGAGA AACTTGCTGA TGGACGCAGC CATTTTTGGG TTGAGCTATG ACCTGCTTAA AGAGTTGAGC ACATGCATGG TAATATGGTA CGTACTTATA GGGTTCATAC AATTTTACAT CATGTTGTTA TTGTAAGTTA GTATAGGAAA CTTGCTTTTT GTTCTCTAGA GATAAGGAAG AAAAAGGAAT GTGAATATAC TATTTCAATG TTGAATTTGA TCGATCTTAA AGTCCTTAAA CAGAGCTCCA AGGCCTTAGA AAAATATCAA CTTGATACAA TTAAGATCGT AAGATT |
| Length | 2916 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 542019.. 546791 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G02250.1 |
| Description | Ribonuclease II/R family protein |
| TAIR curator summary | Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis. |
| Alias | [ATMTRNASEII][EMB2730][RNR1][ARABIDOPSIS THALIANA MITOCHONDRIAL RNASE II][EMBRYO DEFECTIVE 2730][ribonucleotide reductase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg483931 | fumarase 1 |
| 5.2915 |
Ahg487276 | NYC1-like |
| 8 |
Ahg490579 | SEC7-like guanine nucleotide exchange family protein |
| 8.83176 |
Ahg478773 | Ribonuclease III family protein |
| 8.88819 |
Ahg470445 | coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family |
| 16.4317 |
Ahg489476 | catalytics;carbohydrate kinases;phosphoglucan, water dikinases |
| 17.5499 |
Ahg931532 | transportin 1 |
| 18 |
Ahg495194 | VEFS-Box of polycomb protein |
| 19.3907 |
Ahg476621 | plastid transcriptionally active 2 |
| 19.799 |
Ahg927390 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|