Detail


ID : Ahg495194

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495194|fgenesh2_kg.8__1010__AT5G51230.2
Sequence
CTCTTTCTCT CTCTCAAGCT GTCACAGTCT CCTCTGTATT CGCGTGAAGA AGATAATTTC TCACGATTAG GGTTTTTTTT TTTTTTTTCC TGGGTTAACT GTTCCATCTC CATTCTAATC TTCAGTTCGA GATCTCTGTC AAATTGTAGA ATCTGTTCTC CATCTAATTA GTTCAAGTCC GAGACTTTGG ATTATGTTGC AGGTTTTGTA GCTGAAGCAA ATTGTAATCT GTGATGGTGT ATGTAGCGAT TCTGGGTATG GTATTGTACT CTAGGATCTC GTAGCCAGAA TGCCAGGCAT TCCTCTTGTC AGTCGTGAAA CCTCTTCTTG TTCAAGAAGC ACAGAGCAGA TGTGCCATGA AGACTCCCGT GTGCGTTTTT CGGAAGAGGA GGAGATTGCT GCTGAAGAGA GCTTGGCTGC TTATTGCAAG CCTGTTGAAC TCTACAATAT CCTTCAGCGC CGTGCTATTA GGAATCCCTT GTTTCTTCAG CGATGTTTGC ATTATAAGAT TGAGGCAAAA CATAAAAGGA GAATACAAAT GACCGTGTTC CTCTCGGGGA CTATAGATGC TGGGGTTCAA ACTCAAAAAT TATTCCCTCT GTATATTTTG TTGGCAAGAC TCGTTTCTCC TAAGCCTGTC GCCGAGTATT CTGCAGTATA TAGGTTCAGT CGAGCATGTA TCCTAACTGG TGGCCTGGGG GATGACGGAG TTAGTCAAGC CCAAGCCAAC TTTCTTCTCC CTGAAATGAA TAGACTCGCG TTGGAGGCTA AATCAGGATC ACTCGCTATC TTGTTTATCA GCTTTGCTGG TGCGCAAAAT TCACAATTTG GCATTGATTC TGGCAAGATT CATTCAGGAA ATATAGGAGG ACATTGTTTA TGGAGCAAAA TACCCTTGCA ATCGCTGTAT GCGTCGTGGC ATAAATCTCC AAACATGGAC TTGGGACAGA GAGTAGACTC AGTCTCCCTT GTTGAAATGC AGCCTTGCTT CATAAAGCTA AAGTCCATGA GTGAGGAAAA GTGTGTCTCG ATTCAGGTGC CCAGCAATCC CCTCACCTCG AGCTCGCCGC AGCAAGTGCA AGTCACCATA TCTGCAGAAG AAGTTGGGGC AACAGAAAAA TCTCCTTATA GTTCATTTTC ATATAATGAC ATCTCTTCCT CTTCATTGTT GCAAATTATC AGGTTGAGAA CACGAAATGT AGTTTTCAAC TACAGATACT ATAACAACAA ATTGCAGAGG ACTGAAGTAA CTGAAGACTT TTCTTGTCCA TTCTGCTTAG TAAAATGTGC CAGTTTCAAG GGCCTGAGAT ATCACTTGCC ATCAACCCAT GATCTTTTCA ATTTCGAGTT TTGGGTAACT GAAGAATATC AGGCTGTAAA TGTCTCCCTC AAGACTGAGA CAATGATGTC CGAGATTAAT GAGGATGACG TTGACCCAAA GCAGCAAACT TTCTTTTTTT CACGGAGGAG GCAAAAGAGT CAGGTACGGA GCTCAAGGCA AGGGCCTCAT CTTGGCTTAG GTTGCGAGGT GCTAGATAAA ACTGATGATG CTCATTCTGT TAGAAGTGAG AAGAGCCGAA TACCACCTGG AAAGCATTAC GAAAGAATTG GGGGTGCTGA GTCTGGTCAA AGAGTTCCTC CTGGCACGAG TCCTGCAGAC GTGCAATCAT GCGGGGATCC AGATTATGTG CAGTCGATAG CTGGAAGTAC AATGTTGCAG TTTGCAAAAA CGAGGAAACT ATCTATAGAA CGGTCGGACT TGAGGAACCG AAGCCTCCTT CAGAAGAGAC AGTTCTTCCA CTCTCATCGA GCTCAGCCCA TGGCTCTAGA ACAAGTACTT TCGGACCGGG ATAGTGAAGA TGAAGTTGAT GATGATGTGG CAGATTTTGA AGATAGAAGG ATGCTTGATG ATTTTGTTGA TGTGACTAAA GATGAGAAGC AGATGATGCA CATGTGGAAC TCGTTTGTGA GGAAGCAGCG AGTATTAGCA GATGGTCACA TTCCATGGGC ATGTGAGGCA TTCTCAAGAT TGCATGGACC CATCATGGTT CGAACACCAC ACTTGATTTG GTGCTGGAGA GTGTTTATGG TGAAACTGTG GAACCACGGC CTTCTTGACG CCCGAACCAT GAACAACTGT AATACCTTTC TCGAACAGCT CCAAATTTGA AAACCCAAGA AACCATTAAT TTAAGTAGAG GAACAAAAAA AAGGGGAGAG AAGAAGAGTT TTGGGGTCTC ATTAACTACT TTTGGTGTTT TAAGAGAGAG GAGCATATTT ATGCATGAAT TTGTCCTCTC TTTTTTTTTT TTAATTTTAT TTATAAATGT GTACATTGGC TCATCTTCGA CGCTTGTTTT TTGAGTACTG CTTTATA
Length2377
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13555971.. 13561619
Download Sequence
A.thaliana
AGI-codeAT5G51230.1
DescriptionVEFS-Box of polycomb protein
TAIR curator summaryPolycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.
Alias[AtEMF2][CYR1][EMF2][VEF2][EMBRYONIC FLOWER 2][CYTOKININ RESISTANT 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg479615 ZIP metal ion transporter family
2.44949 Ahg943174 Protein of unknown function DUF106, transmembrane
6.32456 Ahg487239 HhH-GPD base excision DNA repair family protein
9.48683 Ahg494108 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
16 Ahg496142 nuclear RNA polymerase C1
18 Ahg487003 Ribonuclease II/R family protein
21.7945 Ahg932206 riboflavin biosynthesis protein, putative
24 Ahg920744 Protein of unknown function (DUF1295)
24.5764 Ahg487152 Protein kinase superfamily protein
25.5147 Ahg483640 Preprotein translocase Sec, Sec61-beta subunit protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression