Detail



ID : Ahg487115

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487115|fgenesh2_kg.6__249__AT3G46100.1
Sequence
ATAAGAGAGA TGCGAGCAAT TCACATCGTG ACGACGCGAT TGAGCTCGAG CTTTATTAGG CCTATTCTTC TTGACTTCGT TTCTTGTTCG CCTCTTCGCC AGTTCTCTAT CCCTAGGCGC TTTATCTGTG CCGCGACCAA GGCCAATGGA GGAGGCAGGT CAGGTTCGAT TGTTGCTCCA TTGGTGGTGA ATGAAGAATT TCAGAAGATC GATGTCAATC CTCCTAAAGA AACTCGTGAT TTCCCTCCTG AGGATATGCG ACTCCGCAAT TGGCTCTTCA ACCACTTCAA AGAGGTCTCA CGGTTGTTTG GGTTTGAGGA AGTGGATTTT CCAGTACTGG AGACTGAGGC ATTGTTCATC AGAAAAGCAG GGGAGGAGAT TAGAGACCAA CTTTACTGCT TTGAAGATAG GGGTAATCGC CGTGTAGCAT TGAGGCCTGA GCTTACACCT TCTTTAGCCA GGCTTGTCAT ACAGAAAGGA AAATCCGTTT CCCTTCCATT GAAGTGGTTT GCTGTTGGGC AGTGTTGGCG CTATGAGCGA ATGACTAGAG GAAGGCGACG TGAGCATTAC CAGTGGAATA TGGATATTAT TGGTGTGCCT GAAGTTACAG CTGAAGCAGA ACTAATTTCA TCTATAGTCA CTTTCTTCAA GCGGATTGGA ATCACTGCAT CAGATGTGGG TTTTAAGGTT TCAAGCCGCA AGGTTTTACA AGAATTGCTA AAAAAGTATG GTGTACCCGA AGACCTGTTT GGAAGAGTTT GTATCATTAT AGACAAGATA GAAAAGATTC CAATTGATGA AATAAAAAAG GAACTTGGGT TCACTGGCGT ATCAGAAGAT GCTATTGAAC AGTTATTGCA AGTGCTTTCT GTGAAGTCCT TGGATGATTT GGAAGATATA CTTGGTGGAG CCGGAGAAGC CATTGCAGAT TTGAAACAAC TCTTCTCGCT TGCTGAAAAG TTTGGTTATT CAGAGTGGAT ACAGTTTGAT GCATCTGTTG TGCGTGGTCT TGCTTATTAC ACTGGTATCG TCTTCGAGGG ATTTGATCGA AAAGGGAAGC TGCGAGCTAT ATGTGGTGGT GGGAGATATG ACAGATTACT CTCCACGTAT GGAGGTGATG ACATTCCTGC TTGTGGTTTT GGTTTCGGCG ATGCTGTAAT TGTTGAATTG CTCAAGGAGA AGGATTTGTT GCCAGAATTG GGACAAGAAG TAGAGAACAT TGTGTGTGCT TTGGACAAAG ATCTCCAAGG AGCTGCAGCC ACCGTTGCAA CCACTCTCAG AGACAAAGGC CAATCCGTTG ATTTAGTATT GGAGAGTAAA CCGCTGAAAT GGGTGTTCAA GAGAGCGGCT CGGGTAAACG CAAGAAGGCT GGTTCTCGTT GGGAAGACAG AGTGGGAAGA TGGTTCGGTC AGTGTCAAGG TTTTGTCTTC AGGTGAGCAA TTTCAAGTCA AACTTAATGA CTTGGAGTAG TATCTAAG 
Length1478
Protein Sequence
Protein Residue
Map Locationscaffold_6: 932842.. 935424
Download Sequence
A.thaliana
AGI-codeAT3G46100.1
DescriptionHistidyl-tRNA synthetase 1
TAIR curator summaryhistidyl-tRNA synthetase
Alias[ATHRS1][HRS1][Histidyl-tRNA synthetase 1]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg488740 GTP1/OBG family protein
17.3494 Ahg476621 plastid transcriptionally active 2
20.4939 Ahg929889 pre-mRNA-processing protein 40C
22.6495 Ahg314966 FAD/NAD(P)-binding oxidoreductase family protein
23.0651 Ahg931589
24.0832 Ahg472801 Metal-dependent phosphohydrolase
26.1534 Ahg487444 ARM repeat superfamily protein
26.3249 Ahg902559 glycoprotease 1
30.4467 Ahg471438 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
32.0624 Ahg951066 1-deoxy-D-xylulose 5-phosphate reductoisomerase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression