| Annotation |
|---|
| Description | jgi|Araly1|487184|fgenesh2_kg.6__318__AT5G04040.1 |
| Sequence |
AGACTACATG CTGTTTCGAC TTTGAGATGA AAACATCATG ATGTTTTTGA AATCCACGTG GGAATTGCGT AAAATCTTAT CCAACGACCT TATTTTTGTT TAATCGAAAA AAGAAAAGGA AAAAAGAAGC CGTCATGATC GGCCATTTCT CGGCCGAGTC TGAGTCTGAC TCTGCGTCCG TGTCACCATT ATCGATCTCT TCTGTCTTAT CTCGTCGCGA TTCCCTATGC AAAAATCTTC TTTTTAAAAT TGCCCCATTT ATTTCTGATC TCTTCTCTCT TCCCAAGTAA ACCTCTCTGC TTCACGTCTC TTCTTTGCTT GTCGATTTTC TCCAGAATCA GGTAAACAGT TGGAAACACA CACAAAATCA TCTTCGAATC AATGGATATA AGTAATGAGG CTAGTGTTGA TCCCTTTTCG ATTGGACCCT CATCGATCAT GGGTCGAACC ATTGCTTTCA GAGTCTTGTT CTGTAGATCA ATGTCACAGC TTAGGCGTGA TCTCTTTCGG TTCTTGTTGC ATTGGTTTCT TAGATTTAAG CTGACCGTTT CACCGTTTGT GTCATGGTTT CATCCCCGGA ACCCTCAAGG GATTTTAGCA GTGGTTACAA TCATTGCTTT CGTGTTGAAA CGTTACACGA ATGTGAAAAT GAAGGCGGAA ATGGCTTACC GGAGGAAATT CTGGAGGAAC ATGATGCGTA CGGCTTTGAC TTATGAGGAA TGGGCTCATG CTGCTAAGAT GTTAGAAAAG GAGACATTAA AGATGAATGA ATCTGATCTC TATGATGAAG AATTGGTTAA GAACAAGCTT CAGGAGCTTC GTCATCGTCG CCAAGAAGCC TCACTTAGAG ACATCATGTT TTGTATGAGA GCTGATCTCG TGAGGAATCT CGGTAATATG TGTAATTCGG AGCTTCATAA AGGTAGACTT CAGGTTCCTA GACATATCAA AGAGTATATC GACGAGGTCT CTACTCAATT GAGAATGGTT TGTAACTCTG ACTCGGAGGA GCTTGCTTTA GAAGAGAAGC TTTCCTTTAT GCATGAAACG CGACACGCCT TTGGTAGAAC GGCTTTGCTT CTGAGTGGTG GGGCTTCTCT TGGTGCCTTT CATGTAGGTG TGGTTAGGAC TCTGGTTGAG CATAAGCTTT TACCTCGGAT AATTGCTGGT TCTAGTGTTG GATCCATAAT TTGTGCTGTT GTGGCCTCAA GGTCTTGGCC AGAACTACAG AGTTTCTTTG AGAATTCTTT GCATTCTTTA CAGTTCTTTG ATCAGCTCGG AAGCGTGTTC TCAATCGTGA AACGGGTAAT GACACAAGGT GCTCTACATG ATATCAGACA GTTGCAATGT ATGCTTAGAA ACCTCACAAG TAATCTCACA TTCCAAGAAG CTTATGACAT GACAGGAAGG ATTCTCGGGA TCACTGTTTG CTCCCCAAGA AAGCATGAAC CTCCTCGGTG TCTTAACTAT TTGACTTCGC CTCATGTGGT TATATGGAGC GCAGTGACTG CATCTTGTGC TTTTCCTGGT CTCTTTGAAG CTCAAGAACT AATGGCTAAA GATCGAAGTG GAGAAATTGT ACCGTATCAT CCACCTTTCA ATTTGGATCC AGAAGTAGGC ACTAATTCAT CTGGACGTCG GTGGAGAGAT GGTAGTTTGG AGGTTGATTT ACCAATGATG CAGCTTAAAG AACTGTTCAA TGTCAATCAT TTTATTGTGA GCCAAGCCAA TCCTCACATT GCTCCGTTAC TGCGTCTAAA GGATTTAGTT CGAGCTTACG GTGGTAGATT CGCAGCTAAG CTCGCGCATC TAGTGGAGAT GGAGGTCAAA CATAGATGCA ACCAGGTATT AGAGCTCGGT TTTCCGCTCG GTGGACTGGC AAAGCTTTTT GCTCAGGAGT GGGAAGGTGA TGTAACAGTT GTAATGCCTG CTACTCTAGC TCAGTACTCG AAGATTATAC AAAACCCGAC TCATGTCGAG CTTCAGAAAG CGGCTAACCA AGGAAGAAGA TGCACGTGGG AGAAGCTCTC AGCCATAAAA TCAAACTGTG GGATCGAGCT TGCGCTTGAT GATTCTGTAG CTATTCTTAA CCATATGCGT AGGCTCAAGA AAAGCGCCGA GAGAGCCGCC ACTGCCACGT CATCGTCTCA TCACGGATTA GCATCAACCA CCCGATTCAA TGCTTCAAGA AGAATCCCAT CTTGGAACGT CATTGCCAGA GAGAACTCAA CTGGTTCACT GGATGACCTA GTCGCTGACA ATAACCTCCA CGCTTCTTCG GGCAGGAATT TAAGCGACAG TGAAACCGAG AGCGTGGAGT TGAGTTCTTG GACAAGAACT GGTGGACCTT TAATGAGAAC AGCTTCTGCT AATAAGTTCA TCGATTTTGT TCAAAGTCTT GATATCGACA TTGCATTGGT CAGAGGATTT AGTAGCAGTC CCAATTCTCC AGCAGTTCCT CCTGGTGGGT CGTTTACTCC AAGCCCGAGA TCCATAGCGG CTCACTCCGA GAGCGAATCA AACAGCAATA GCAACAATCT TGGAACAAGC ACTTCAAGCA TAACAGTTAC TGAAGGTGAT CTTCTACAGC CAGAGAGAAC GAGTAACGGG TTTGTGTTAA ACGTCGTCAA AAGAGAGAAC TTGGGAATGT CGTCAATTGG GAATCAAAAT ACAGAGTTAC CGGAGAGTGT ACAGCTCGAT ATACCGGAGA AGGAGATGGA TAATAGCTCT GTATCAGAAC ATGAAGATGA CGATAAAGAA GAAGAAGAAG AACATAACGG CTCGAGTCTG GTTACTGTTT CTTCAGAAGA TTCCGGTTTA CAAGAACCGG TGACTGGTAG TGTTATAGAT GGTTAGAGTG ATTGATTCAA GTGAATAGAT TCTCAATTAA ATTTGCAGAG TTTCCAAAGG GTTTGGTGCG CCTCTTGTGT ATGTTTGCAT TGCTTATTGT TTGAAATTCA TTTGTGAAAT CGAAATATAT CTGTAAATTT CAGAAAAAAA TTCTCTCATT CATTACA |
| Length | 3017 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1235925.. 1239555 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G04040.1 |
| Description | Patatin-like phospholipase family protein |
| TAIR curator summary | Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type. |
| Alias | [SDP1][SUGAR-DEPENDENT1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.14143 |
Ahg938971 | RNA binding |
| 8.24621 |
Ahg319027 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 8.544 |
Ahg481311 | |
| 9.38083 |
Ahg937466 | glutamine-dependent asparagine synthase 1 |
| 9.8995 |
Ahg945578 | Uncharacterised conserved protein (UCP012943) |
| 12.49 |
Ahg927592 | RING domain ligase1 |
| 13.5647 |
Ahg471761 | Galactose oxidase/kelch repeat superfamily protein |
| 18.4932 |
Ahg936076 | GDA1/CD39 nucleoside phosphatase family protein |
| 22.8035 |
Ahg487656 | peptidoglycan-binding LysM domain-containing protein |
| 23.3666 |
Ahg489028 | 5'-AMP-activated protein kinase beta-2 subunit protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|