Detail



ID : Ahg489028

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489028|fgenesh2_kg.6__2162__AT5G21170.2
Sequence
ATCTCTCTCC TCTCTTTGTC TCTCTCACTT CTGTGATTTG GGCTTTTTCT CAGATGGGAA ATGCGAACGG CAAAGAAGAC GACGCTACCG CCGCCGCCAG CGGTGTTACC TCATCTTCGG CGAGATCCAA CGGCGGCGAT CCTTCTGCAC GCAGTCGTCA TCGTCGTCCT TCTTCAGATT CTATGAGCAG TTCTCCTCCC GGAAGTCCCG CTCGATCTCC ATCTCCTTTC TTATTCGCTC CTCAGCCCAC ATTGTTATTC CACCTTACAT CTTACAACAT TTGCTCACCT ATGCGTCACC TCTTCCATTG TTTAGGCATA ACATGTGTAC CTAATGGCTG CATTTCGTGT CGGATGGTTC CTGTGGCTCC ATTGCAGAGA GCTAACGCCC CTCCTTCACC TAATAACATC CAATGGAACC AATCACAGAG AGTTTTTGAT AATCCACCAG AGCAAGGAAT CCCTACTATC ATTACTTGGA ACCAAGGAGG TAATGATGTG GCGGTGGAAG GATCCTGGGA CAATTGGAGA TCAAGGAAGA AGCTGCAGAA ATCGGGAAAA GACCACTCAA TTCTCTTTGT CCTTCCATCT GGCATATACC ACTACAAGGT GATTGTCGAC GGTGAATCCA AATACATTCC AGATTTACCA TTTGTATCAG ACGAAATTGG CAATGTCTGT AACATTCTCG ATGTTCATAA CTTTGTGCCA GAAAACCCAG AAAGCATAGT GGAGTTTGAA GCGCCACCGT CACCTGATCA TAGCTACGGT CAAACCCTAC CAGCCGCAGA AGATTACGCA AAAGAGCCAC TTGCGGTGCC ACCTCAGCTT CATCTAACAC TTCTTGGCAG CACGGAAGAA AGAGCCGTAG CCACAAAGCC TCAACATGTG GTGCTTAACC ATGTGTTCAT AGAGCAAGGA TGGACTCCTC AATCCATAGT AGCTTTGGGT TTAACCCAGA GGTTCGAGTC TAAGTACATA ACTGTTGTCC TCTACAAACC GCTCACACGG TAACCCTAAA AATTCAGTGC CACATTGTTC TTTTCATATC TCAATTATGT GAAACCTTTA CTTTGTTCAT AGTGAGTGCC CAACATTGAG TTTATTAACC TCTTTCTTAC CTGGTTTGTG GTGCTTGTGT ACAAAGCTTC TCTCATTGCA ACGATTGTAC TCTTATATAT TTCCTGCAAA AACTGTGAAA TACATTCTCT AATAATGGGC TATAACAAGC TTATCTGCTA GCAA 
Length1244
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8570237.. 8573073
Download Sequence
A.thaliana
AGI-codeAT5G21170.2
Description5'-AMP-activated protein kinase beta-2 subunit protein
TAIR curator summaryEncodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism.
Alias[AKINBETA1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg892659 MEI2-like 4
3 Ahg485217 nuclear factor Y, subunit C1
5.83095 Ahg496551 GroES-like zinc-binding alcohol dehydrogenase family protein
6.08276 Ahg941394 beta-amylase 3
6.32456 Ahg895886 Protein kinase superfamily protein
7.07107 Ahg914474 Aluminium induced protein with YGL and LRDR motifs
7.74597 Ahg490221 Protein phosphatase 2C family protein
8.77496 Ahg941391 CHY-type/CTCHY-type/RING-type Zinc finger protein
8.94427 Ahg949430 beta-xylosidase 1
9.48683 Ahg941577 Raffinose synthase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression