Detail



ID : Ahg487250

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487250|fgenesh2_kg.6__384__AT5G04710.1
Sequence
ATGGCGGCCA TAGCTCGTCT TCCACTAACT CATTCTCTTC CCTCCAAATT CAATCCTTCA TTATTCCTCT CTCAATCTAT TTCTTTTCCT ACTTATCTCC ATCGCTCTCC CTTTCGCTCC TTCTCTCCAA TCCTCTGCTC CTCCTCCTCT CTGGGTGATT CGAGATCGCT GGGGAGTGAT TCTAATGCGT CGATTGTCGG GGATCTTCTG GATTATCTTA ATGAATCCTG GACACAGTTT CACGCCACTG CTGAGGCGAA GAGACAGCTT TTGGCTGCTG GGTTTGATCT CCTCAGTGAA AACGAGGACT GGAAGCTGAA ACCTGGTGGC CGTTACTTCT TTACACGAAA CATGTCCTGT TTGGTTGCTT TTGCTGTCGG CGAAAAGTAT GTTCCTGGTA ATGGTTTTCA TGCCATAGCT GCTCACACCG ATAGCCCGTG TCTTAAACTT AAGCCCAAGT CTGCTTCATC TAAGTCTGGC TATCTCATGG TGAATGTTCA GACTTATGGA GGTGGTTTGT GGCACACATG GTTTGATCGA GACTTGAGTG TTGCGGGGCG AGCAATTGTG AGAGCCAGTG ATGGCTCGTT TGTTCACAAG CTCGTCAAAG TGAAGAGGCC ATTACTAAGA GTACCCACTT TGGCCATTCA TCTTGATCGC ACAGTGAACA GTGATGGATT TAAACCGAAT TTGGAGACCC AACTTGTTCC GCTACTGGCA ACGAAATCAG ATGAATCCTC AGCAGAGTCC AAGGACAAAA ATGTATCCTC CAAAGATGCC CATCATCCAT TACTCATGCA GATTTTGTCA GATGACCTGG ACTGTAAGGT CGAGGATATA GTGAGTCTTG AGTTAAATAT CTGTGACACC CAACCTAGCT GCCTAGGAGG AGCAAACAAT GAATTCATAT TCTCTGGAAG ACTAGATAAT CTTGCATCAA GTTTCTGTGC TTTGAGAGCT CTCATTGATT CATGTGAATC ATCGGAAAGC CTGTCGACTG AACATGATAT CCGGATGATA GCTTTATTTG ACAACGAGGA GGTTGGTTCA GATTCATGTC AAGGTGCAGG GGCGCCCACT ATGTTTCAAG CAATGAGACG GATTGTAAGT TCCCTAGGCA ATAAGCAGGT CACTGAATGT ACATTTGACC GTGCTATCCG GAAATCTTTT CTTGTGTCTG CAGACATGGC TCATGGAGTG CACCCCAACT TTGCAGACAA GCATGAAGAG AACCACCGTC CTCAACTACG CAAGGGTCTG GTTATCAAAC ATAACGCAAA CCAACGCTAT GCAACCAGTG GAATCACTTC TTTTCTTTTC AAAGAAGTAG CAAAGCTCCA TGATCTTCCA ATTCAGGAGT TTGTGGTGAG AAATGATATG GGATGTGGCT CAACAATAGG ACCTATATTG GCTTCAGGAG TGGGGATCCG AACTGTTGAT TGTGGCATAG CTCAGCTTTC TATGCATAGT GTGAGAGAGA TTTGTGGAAC AGACGATATA GACATCGCGT ACAGACATTT CAAGGCGTTT TATCGATCTT TCTCAAGCGT AGACAAGAAG CTCGTTGTGG ATGATTAACT CCCCTGGATA TTAATCTCGA GCTCAAAGAT CTTAAGACAT GGTGAGAATG TTCAGCTAGT TACTTCTGTT CGTGGCTGGT CCTCAGTCTC ACAACAAGAA CAGAACCTAA AATTTGATTC TCTTGTTTAG GAAAATTGGA ATATAATCTT CAAGGTTAAG GTTCCGGTTT GTAATACCGC CTATTGTTAT CTTGACAAAT AAGATTCTTT TTAATTTGTC GAATTTTTAT ATTTTTTCAT ATACAGAAGA ACCTTTAATT TTATTTCCAA CAG 
Length1853
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1558791.. 1562003
Download Sequence
A.thaliana
AGI-codeAT5G04710.1
DescriptionZn-dependent exopeptidases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.53939 Ahg328224 BR-signaling kinase 1
12.3288 Ahg471559 sec7 domain-containing protein
17.6635 Ahg324546 homeodomain GLABROUS 1
18.7617 Ahg943724 Pentatricopeptide repeat (PPR-like) superfamily protein
21.5407 Ahg943408 BRI1 suppressor 1 (BSU1)-like 1
22.6053 Ahg483691 WD-40 repeat family protein / beige-related
23.6643 Ahg944576 sister-chromatid cohesion protein 3
26.533 Ahg470464 RING/U-box superfamily protein
27.6586 Ahg476539 signal peptide peptidase
27.6586 Ahg473189 Magnesium transporter CorA-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression