Detail



ID : Ahg943724

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943724|scaffold_604268.1
Sequence
AAACCAGCGC GGAGGAGTTT ATGAAGATGG TGAACATGTC GGTTCTACCC ACTTTCTCGA AGCGATCCGT TTCAAGACTC TCAACTCTAC GTCATCTCCC TCAGAGACAA ACAGAAAATG AGATTCTTGA GAGGGCTTCT AGGATTCCAT CCACTCACGA AAACCTAGCC GTCTCAAGAC TCCCACATGC TCAACGTCGC CGCTCTCCAA GACAAACGGA AAATGAGAGT GTTGAGAGGT TTTCTAGTAT TCCATCCACT ATTCCCGAAA ACCTAGCCGT CTCAAGACTC CCACATGTTC AACGTCGCCG CCCTCCCAGA CAAACAGGAA ATGAGAGGTC TAGTATTCCG ATTCATGAGC CTGTGTTTAG TAGTATTCCG AATTTTGGGC CTATGTTTCG TATTCCGAAT CATCATGAGC CTATGTTTCG TACTCGGAAT CCCCTTACTA GGGATAGCTC AGTGCGGAAG CTTGGTGAGA GCTTTGTATG TATAATGGAA AGCTTCCAAA GGGGGTCCAC AAGTGCTGTG ATGGGCATGC TTCAGTATGA ACATGTATTG GATCCTCAAT TTGTCTCTTC AGTTCTTGAG ATGAACGTTG ACATCGATGC CAAGATTACT TTTTTCAACT GGGCTGGTCT CAGAAGCAAT TATATACATA ACCACTCCAC CTACAAGGCC TTCATACATT TGCTTGAAGA GGCTAGGCTT GCTACAAGGC TTTCAGATTG GGTATACCCC ACCCTGTTGG GCTTGTACTT GAAGTTCCGT AAGTTTGAGA AAGCTTTACT TCTTGTGGAG GAGATGGAAC AAACGCCAGG TTCCTCGCCA GCTTTTTATT CTTACTACAC GGAACTGATT AAGGAATTTG TCAGAGTGGG GAAGATAGAA GAAGCTTATT GTTTACATCT GAACGTTTCT AGAAATGCGT TGAGTCCCGA TCTTGTCTTC TTAAAGAAGC TGATTAACAT TTTAAGCAAA ATAGGTAGAG TGGAGCTGTT AACAAAGGTC GCGGGTGTGT GGACATTCAT GCATAGAGCT TATTCGTACA GTGCTTTGAT TATGACTCTA TTTGAGTCCA AAGCACCTGA TTCAGAAGTG AGCTATTTGT TTGATGAGAT GAAGGCTGAC GGTGTTTCCC CTGTTGGATT AACTTACGCA ATCCTTATAA ATGGCTTTTG TGAAAGAAAT AAAGTGGAGA AAGCTCTGTT GCTTCTTGAG GAGATGGATG AGGAAGACCT TCCAACTTTT CCAGCGTGTT ACAGATTCAT AAAGTCGATA AGAAACCAGG CAGGAAATGA GCTATCTAAG GAAGAAGAAG AGAATTTCCG AATTGTAACT TGTCGAGTTT ATGCGGTCAT GATCAAACAT TTTGGGAAGC GTGGAAAGCT CATGGATCTC TTCAATGAGA TGATTAAGGA GGAGGACCAA GAAGAAAGTG GTCCTGATGT CTACGCTTAC AATGCGCTTA TGTCAGGGAT GGTGAAGGCT GGTATGATAG ATGAAGCTAA TTTGTTGCTT AGAAAAATGG AAGAGAAGGG CTGCATCGCG GATGTGAATT CGCATAATAT CATAATGAAT GGGTTTGCTA GAACAGGTGT GCCAGAGCGG GCTATAGAAC TGTTTGAAAC GATGAAGCAT TCCGGGCTTA AGCCTGATGG TATCACTTAC AATACTCTTC TTGGATGTTT CGCACATGCT GGAATGTTTA AGGAGGCTGC AAGAATGATG AGAGAGATGA AAGATGAAGG CTTTGTGTAT GATGCCATCA CTTACTCATC TATACTTGAA GCTGACGGCA ATGTGGATCA AAATCTTTTG CAGCAAATGA TGACGACATG GGAAGCAGGA TCAATGAGCA CGAGCACGAG CAAAGCATCG ATGAGATTGG TGTACAAGGC ACTCCTACTC CTTCAGACGA TGAACCCGCT GGTTCCAGTT AAAAAGGGGT TCATGCTCAA GCCTGGCTTG TTCAATATCT AATTATGTTT TGTTAATCTA TA 
Length2002
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23332585.. 23335153
Download Sequence
A.thaliana
AGI-codeAT3G16010.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg920104
10.3923 Ahg332172 zinc finger protein-related
11.6619 Ahg488208 FIZZY-related 3
15.3948 Ahg476621 plastid transcriptionally active 2
18.7617 Ahg487250 Zn-dependent exopeptidases superfamily protein
24.0416 Ahg474152 Alanyl-tRNA synthetase
32.8634 Ahg932598 Beta-galactosidase related protein
38.1576 Ahg919411
38.4187 Ahg489475 TCP-1/cpn60 chaperonin family protein
41.2674 Ahg918788
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression