Detail



ID : Ahg470464

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470464|fgenesh2_kg.1__418__AT1G04790.1
Sequence
GATTGATCGA TGCTGTTGCT TCTCATCGAA CAACTAGGGT TTCGATTCGC ACATTCGAAT CAAATTCAAT CAGGATGGAG GATATTGACA TTGACATGGT AATCAGCATA CCTGATACTC CAGATAGACC CGTACGACAT CGAGAGGTTA AGAGAAGGCC ACAATCTCCA GAACCACCAT TAAGATATCA AAGAGAGGAA TACCGTAATT ATCTTAACGG AAGAGCCAGA CCAGTCCCTG AAATTGGGGA CAACCGGGAA AGTTCTGATA CACGAACTGA GAATGGACAT CGCTCGCATG CTTCTGGAGG CAATGCTTTG TTTAGGAGAA CTGTGGTTGA GCAGGATAAA GGAAAATCCA TCTCCACTGA TCCACGTGCG GCTCGTGTAG AGAAAAATCC GGTTTTAAAT CTGAATCAAC GTGACGGACA TGCTCATGTT GCTGCATCGA GATGCTTACC ATTTGAAGAT ATAAGAGAGT TGCGCACAAG TAATGGTTGT TCTCCTTTAC GAGTTGATCA TAACTCTTTT ATGCTGCCTG GGAATAGTAA TAAGGGTAAA GAAAAAGCAG ATTCTGGCTC TGTTTCTACT AGAGAAACAG TTGACCTTTC CAGTGGCGCA AAACCACAGA ACAGAGGCAC TAAAAGATTG GTGAGACATG GCTGCATTTC TCCACATGGA ATAGCTGCTA GAGCTAGACA AGCTGCTGAT ACCAATTCCA AGGACACAGT TAGTGTTGAA CTGGAACTAG CTCCTGAAAC TGCATCTTTG ATTGGCATAA GAGAGATTGT TTCTGAAAAT GATATTCACG GAAGAGCTAG AGGCAAAAGA CCTGAAATTT CTCGTAGCAG GGTGGCGAGT AGAGACGGTT CAGAGGGGTG GGTTAGTACA CGTAACCGGA AATTAAATAT GGACCAAGAA TTGAATCAGA GGGATGAGAG TGACACACGC GGAATTTGTA GCTCTGTCTC CAGACTTGAT GTGCATGAAA CCGGTGTAGT TGAAAGAGAA GCTAGACAAC AACGACGGCG GAAAAATGGA TTTACTACTT CAACGGCTTC AAATGAGCCA GAAGTTACTG TTATTAGATC TTCTGGGGAA CCATCTAGTT CAAGGCCACC AAGAATCCAG AATCATTTAA GACACGGCAC ACAAGTGTTG GAAATTGAAG ATTCATCTCC TGAAGTACGG GTCTTCCGGG GTCCTAGACG TGTTGAAAAC AATGTATCTG ATGTGAATGT AAGACAAATA GAAGCAGATG AGATATTGGC CCGTGAATTG CAAGAACAGC TGTACCAAGA AGAGACCTTG ATCAGACACC AGCAGATTGA TGAAAACATA GCAAGGTTGC TGGAACAAGA AGAGAATTCT ATTCGTGCTT CTTCTAGTCG TTCTTCTTCT ACTCGTTCTA CCCGAAACTC TAATACCATT ACAGCAAACC GAGGTGGGAG AAGTCGCCTG GAAGCGCGAC TGCAACAACA TTCTTCAAGG AGGCGATTGA ATCCTCCACA GGCTCGTGCT CCTGTTAGAG CACCAACACG GGGTCGAGGT TATCGTTTAG GCCGTGCATC TGCTTCACTA CACACAGCTC TGAATCTCAG TTTTCCATAT GATATGGGCA TAGAATCGAG AATGGATCTT CTGGAGGGAT TAGAGAATGC TATTGGACAC TCCATTAACA ATAGTAATCT TCTTCATATG GATCGTGACT TTACTGAAGA TGATTACGAA TTGCTGCTAG CTCTTGATGA AAACAACCAT CGACATGGCG GTGCTTCTAC TCATCGCATT AACAATTTGC CAGAGTCTAC AGTTCAAAAT GATAATTTTC AAGAAACTTG TGTTATTTGT CTGGAAACAC CGACGATCGG AGACACCATA CGTCATCTTC CTTGTTTGCA CAAATTTCAC AAAGATTGCA TTGATCCATG GCTAGGACGG AGTAAATCAT GTCCGGTTTG CAAATCCTCA GTTACTTGAC CAGGTTTTCA AGCTCATCGG GGAATGTAAC AAATTTACCA TTTTACCCTT CCAAGCCGGT GGAT 
Length2044
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1536315.. 1539513
Download Sequence
A.thaliana
AGI-codeAT1G04790.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.23607 Ahg480005 Helicase/SANT-associated, DNA binding protein
5.65685 Ahg319110 Homeodomain-like superfamily protein
6.245 Ahg485626 alpha/beta-Hydrolases superfamily protein
9.69536 Ahg486936 HEAT repeat-containing protein
9.79796 Ahg496370 signal recognition particle-related / SRP-related
10.247 Ahg926384 anthranilate phosphoribosyltransferase, putative
18.1108 Ahg470774 Transcription factor IIA, alpha/beta subunit
20.8567 Ahg495092 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein
26.533 Ahg487250 Zn-dependent exopeptidases superfamily protein
29.6985 Ahg480594 isocitrate dehydrogenase subunit 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression