Detail



ID : Ahg487275

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487275|fgenesh2_kg.6__409__AT5G04890.1
Sequence
TAATTGATAA TGGCAGCGAG ACAACAACAG AAAGGAACAG GCTTGGGGGT TCAGTACGAG GACTTTGTCC CCAAATCCGA ATGGAAAGAT CAACCTGAAG CCACCATTCT CAACATTGAC CTTCCAGGTT TTGCAAAGGA GCAAATGAAA GTAACGTATG TGCACAGCTC GAAGATGATA AAAATCACGG GAGAACGTCC CTTGGCTAAT CGAAAATGGA GCCGTTTCAA CGAGGTGTTC ACTGTTCCAC AGAATTGTCT AGTGGATAAG ATCCATGGAA GCTTCAAGAA CAATGTCCTC ACCATCACCA TGCCTAAGGA GACGATCACA AAGGTGGCTT ATCTTCCAGA AGCTTCTAAA ACTGAAGCTG CTGCTCTGGA GAAGGCGACG AAGCTAGAGG AGAAGAGGTT GTTAGAAGAA TCCAGAAGGA AAGAGATGGA AGAGGAAGAA GCTAAGCAGA AGAAGAAGCA GCTTCTGGAA GAGAAAGAGG CGCTAATTCG GAAGCTGCAA GAAGAAGCTA AAGCAAAGGA AGAGGCTGAA ATGAGGAAGC TTCGAGAAGA AGCTAAAGCA AAGGAGATGG CTGAGGCAAA GCTTCTAGAA GAAGCTAAGG AATCAAGAGA GAAACTTGAG GAGTGGAAGC TTAAGGAAAG GAAGCTTGAG GAGAGGAAGC TTGAGGATAT GAAGCTTGCG GAAGAAGCTA AACTAAAGAA GATCCAGGAG AGAAAGTCTG TTGATGAATC TGGAGGAAAA GAGAAGATAC TAAAGCCAGA AGTGGTCTAT ACAAAATCCG GGCCCGTGGC TACTCCCAAA CCTGAGTCCG GGTCTGGTCT CAAGTCCGGG TTTGGAGTAG GCGAGGTGGT GAAGTCAGCG GAAGAAAAAA TAGGAAACTT GGTGGAGAAG GAAAAGAAAA TGGGGAAAGG GATAATGGAG AAAATAAGGA GGAAAGAGAT AACAAGTGAA GAGAAGAAGT TGATGATCAA TGTAGGAGTG GCTGCTCTTG TTATCTTTGC TCTTGGAGCT TATGTTTCTT ATACCTTCTG CTCTTCTTCT CCTTCTTCTT CCTCTTCGTC TCCTTCTTCA TCATCATCTT CTTCTACCAA ACCAGAATGA TATA 
Length1114
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1636928.. 1638163
Download Sequence
A.thaliana
AGI-codeAT5G04890.1
DescriptionHSP20-like chaperones superfamily protein
TAIR curator summarySpecifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs).
Alias[RTM2][RESTRICTED TEV MOVEMENT 2]
Gene coexpression
MR
MR Locus Description
17.6068 Ahg926001 lupeol synthase 2
64.9615 Ahg933363
92.4878 Ahg338779 Pre-mRNA cleavage complex II
96.3431 Ahg478464 arginine-tRNA protein transferase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression