Detail



ID : Ahg926001

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926001|scaffold_201562.1
Sequence
TGTCCAACTT TAGATAGGCT CATGTGGAGG TTAAAGATAG GAGAAGGAAA TGGGGAAGAC CCTTACTTGT TCAGCAGCAA CAACTTTGTC GGACGTCAAA CATGGGAGTT TGATCCCAAA GCTGGCACAA TCGAGGAACG AGCCACTGTA GAAGTAGCTC GCCGGAGTTT CTTGGTCAAC CATTCTCGTG TTAAAGGTTG CAGTGATCTC TTGTGGAGAA TGCAATTTTT GAAAGAGGCT AAATTCGAGC AAGTGATCCC GCCGGTGAAG ATTGATGACG CTGAAGGCAT AACGCATGAA AATGCAACGG ATGCATTACG GAGAGGAGTT TCTTTCTTCT CGGCTTTGCA GGCCTCCGAT GGCCACTGGC CGGGAGAAAT CACAGGACCT CTCTTCTTCC TTCCTCCATT GGTATTTTGT TTGTATATCA CAGGACACCT TGAGAAGATA TTCGATGAAG AACATCGCAA AGAGATGCTT CGACATGTCT ATTGTCATCA GAACGAAGAT GGTGGATGGG GATTACACAT TGAGAGCAAG AGCATTATGT TCTGCACCGT GTTGAATTAC ATTTGCTTGC GTATGCTCGG AGAAGGTCCT AATGGAGGAC GAGAAAACGC GTGTAAACGG GCTAGACAAT GGATTCTTGA TCGTGGTGGT GTGACCTATA TTCCGTCCTG GGGGAAAATT TGGCTATCGA TACTAGGAAT CTATGATTGG TCCGGAACCA ATCCAATGCC TCCTGAGATC TGGTTGCTTC CTTCTTTCCT TCCAATACAC TTAGCGAAAA CTTTGTGTTA TTGCCGGATG GTTTACATGC CCATGTCGTA TCTATATGGT AAGAGGTTTG TTGGTCCAAT AACACCTCTT ATTCTGCAAC TGCGTGAAGA ACTCCATTTA GAACCTTACG AAGCAATCAA CTGGAATAAA ACACGGCGTC TTTACGCAAA GGAAGACATG TATTTTCCCC ATCCTTTGGT TCAAGATTTG ATATGGGACG CTCTTTACCT CTTTGTGGAG CCGTTCCTTA CCCGTTGGCC GTTAAACAAG CTTGTAAGGG AAAAGGCTCT TCGGCTGGCA ATGAAACACA TACATTACGA AGACGAGAAT AGCCATTACA TCACTATCGG ATGTGTTGAG AAGGTGTTGT GCATGCTTGC TTGTTGGATT GAAAACCCGA ATGGGGACTA CTTCAAAAAG CATCTTGCTA GAATACCGGA TTACATGTGG GTCGCGGAAG ACGGAATGAA AATGCAGAGC TTTGGAAGTC AACTATGGGA TACAGGGTTT GCGGTTCAAG CTATACTTGC TTGTGATCTC TCTGGTGAAA CTGGTGACGT ACTTAAGAGA GGACATGATT ACATTAAGAA ATCTCAGGTT AGAGAGAATC CTTCTGGTGA CTTTAAGAGC ATGTACCGCC ACATATCGAA AGGAGCATGG ACTTTATCTG ATCGAGATCA TGGATGGCAA GTTTCAGACT GTACAGCAGA AGCTTTGAAG TGTTGCCTGC TGCTTTCTAT GATGCCAGCT GAGGTGGTTG GCCACAAAAT AGATCCCGAA CAAATATACG ATTCGGTTAA TCTCTTGCTA TCTTTTCAGA GTGATAATGG AGGTGTGACT GCATGGGAGC CTGTCCGTGC ATATAAATGG ATTGAATTAC TCAATCCCAC AGAATTTCTG GCTAATCTTG TGGTTGAGCG TGAATATGTG GAATGTACAT CAGCTGTTAT ACAAGCTTTG GTTCTGTTCA AGAAACTCTA TCCGGATCAC AAGACAAAAG AGATCACCAG GTCCATCGAG AAAGCGGTGC ATTTCTTGGA AAACGAACAA AGGTCGGATG GTTCATGGTA TGGAAATTGG GGTGTTTGTT TCATTTATGG CACATGGTTT GCTCTTGGCG GCCTGGCAGC CGCGGGTGAA ACATATAAAA CTAGCCAAGC AATGCGTAAA GGTGTTGAAT TCTTACTCAG GACACAGAAA GATGATGGAG GTTGGGGTGA AAGCTATCTG TCATGCCCTG AACAGAGATA TATACCATTA GAAGGGAAAA GATCCAACCT GGTGCAAACA GCTTGGGCAC TAATGGGGTT GATTCATGCT GGACAGGCCG AGAGAGATCC AATAACTCTA CACCGTGCTG CGAAACTTAT CATCAATTCG CAAATGGAAA ATGGAGATTT CCCTCAGCAG GAAATAGTAG GAGTGTTCAT GAGGAATTGC TTGATACACT ATGCTACCTA TAGAAACACT TTCCCATTAT GGGCACTTGC TGAATACCGA AAAGCTGCGT TCTTAAGATG ATTAAACACA CAAGTCGCTT CTA 
Length2323
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11767432.. 11771436
Download Sequence
A.thaliana
AGI-codeAT1G78960.1
Descriptionlupeol synthase 2
TAIR curator summaryEncodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.
Alias[ATLUP2][LUP2][lupeol synthase 2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg925616 PEBP (phosphatidylethanolamine-binding protein) family protein
6.9282 Ahg495722 expansin A14
7.74597 Ahg890129 PEBP (phosphatidylethanolamine-binding protein) family protein
10 Ahg332172 zinc finger protein-related
11.4018 Ahg946685
12 Ahg915420
13.8564 Ahg494915 ENTH/VHS/GAT family protein
17.6068 Ahg487275 HSP20-like chaperones superfamily protein
19.6214 Ahg487211 Pectin lyase-like superfamily protein
20.0499 Ahg480902 Glycosyl hydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression