Detail



ID : Ahg487278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487278|fgenesh2_kg.6__412__AT5G04920.1
Sequence
TTGGTCAACC GATCTATTGA TTGGACTAGA GAGGAACGCA GCTGAAAAGC TGTATGATCT ATCTGCTTCC GAATTGAGTC TCCATGGCTA GTGGAAGCAG CAGCATCGGA ATCGATGGTT TTTTTGAGAA CGCGGAGGTG ACTACGAGTG GAAGACCAGT GCTTCGTCGC AATGAGGTCG AATGTTTCCT CCTATCCTCC GTCGATATAG ATTCCGAAGA TGATCCGCCG CGATTCACCG CTTTGAGGTC TGGAAATCTA ATTCTAACAA CTCATCGTCT CATATGGATT CCTTCTCAAT CAAACGGAGC TGTTCCTTCT TCAGTTCCTC TCGCCGCCGT TACTCATATC TTCTCCCATA AGAAATCAAT CAAGTCTATG TTCCATTCGC CGAGAATCCG ATTTCAAGCG AACCCGGGTT CGATTGTTGT AACGATTGTC TTTAGGGGGA AAGGGGATTT TGATGAATTT TTGACGAAAT TGTGGGAATG TTGGAGAGGC AGAGCATGGG AAGAGGAGGA GAAGAGCGAG AGTGAGACTT CAAGGTCAGG ATCTGGAACT GTTGCGCAAG GTTTGTATGG AAACGATGGA ACGGTGAGGA TGGTGGGATT GGCTGGGATT TTGAGGAAGG AGCAAGAACA GTGGGAGAGC ACAGACAAGA GCTTGCAAGA TGCTTTTCAG GATTTGAATG CTCTTATGAG TAAGGCTAAA GAGATGGTGA GTCTGGCAGA AAAAATGCGG CAGAAGCTTT TGTCTGCTCC TAGTAGTCAG AACGGTTCAA CTGATGATGA AGAAATGGGG TCCAAAGAAG AAATGCAACA GTGGATGTTG AGCGTTGGTA TTATCTCCCC AGTTACAAAG GAATCTGCTG GTGCATTGTA CCACCAAGAA TTGTCCCGCC AGTTGGCAGA TTTTGTCAGA ATCCCATTAG AACAAGCTGG GGGGATGATC AGCCTTACTG ATATGTATTA CCACTTCAAC CGAGCTCGTG GGACAGAGTT GATTTCTCCA GACGATTTGT GGCAAGCTTG TACCCTCTGG GAAAAATTTG ATGTTCCAGT AATGCTGCGG AAGTTTGATA GCGGTGTGAT GGTCATCCAA AACAAGTCTC ACAGCGACGA AGAGGTTATG AGTAGAATTA AAATGCTTGT GACAAAAACT GAAACTCTTA GAGTTGGAGT CACTGCTAGT GATGCAGCTT TGACGCTGAA GATCGCTCCT GCCATGGCTA AGGAACATCT ACTAACTGCA GAGACCAAAG GTTTGCTATG TAGGGACATG AGCCCAGATG GGCTTCGATT CTATTTCAAT CTGTTCCCCG AGATCGATCC CACCAATATC CATATAGTCA AGGACTTTGG GACGTACGGT GAATGGATCA AAGCGACCAG TTTGTTGTCT GTATGACAAA GCTTTTTAAT AACACATACA AAATATACAA ACATAAATTT GGATTTTTGA CTCAAAAATG CCAATAATTT TTTTTGTAAT TGTTCAGACG TGTGAAATTG CATGCAACAG TATTGAAAGA AACTGATTTT TTTTTTGGTT CAATGCAGTT TCTGGAT 
Length1567
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1654418.. 1657017
Download Sequence
A.thaliana
AGI-codeAT5G04920.1
DescriptionEAP30/Vps36 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg912447 Family of unknown function (DUF572)
13.784 Ahg913127
15.1658 Ahg486329 citrate synthase 2
15.4919 Ahg344798 Excinuclease ABC, C subunit, N-terminal
16.7332 Ahg479576 Transmembrane proteins 14C
18 Ahg492543 cysteine-rich RLK (RECEPTOR-like protein kinase) 14
20.664 Ahg488550 Target of Myb protein 1
21.9089 Ahg478986 Regulator of chromosome condensation (RCC1) family protein
27.0555 Ahg487008 Protein kinase superfamily protein
30.0333 Ahg324433 O-acetylserine (thiol) lyase isoform C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression