Detail



ID : Ahg487302

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487302|fgenesh2_kg.6__436__AT5G05130.1
Sequence
ACTTTCGAGC TCCTTCTTCT CTCCGTCATC GTTCCTCTCC CATCCCATGG CACAGTTTCT TCGACACTTC TCTTCCCCTC CCATGGCGAA CGAAGACGAA TTTCAATCTC CGGTAGAACC ATCGCAGCAA TCTCAGGACT GTGTTTCAGA GTCTTATTTG ATAGGGTTTG TTATCGCGAA CATAGTAGGG TTAAAGTACT ATTCCGGCCG AATCAACGGT CGAGAGATGG TAGGTCTGGT TCGAGAACCC TTGAACCCAT ATGACAATAA CGCAATCAGA GTGCTCAACA CACGATCTGA GCAAGTGGGT CACATCGAGC GTACAGTAGC AGCCGTTCTC GCGCCGATGA TTGATTCTCA CACGATCATC GTCGAAGGTA TTGTACCCAA TACTCGTTCT AACTCCAATA GGTTTAAAAT TCCTTGTCAA ATTCATGTTT TTGCAAAGTT AGAAGCCTCC TCTACTGTCA AATCGACGAT TTCTAGAGGT GGGTTAGTGT TGATTTCGGA TTCAGATACA TCGTTTGGGT TATCTGAGGC TGCTGTCGTT AAGGAACAGA TGGGTAATGG AGATAAGAAG AGTGTTGACA AGATTTTCAA ATTGGTTGAT AGGAATGTGA AGTTAAAGGG GAAATTGGTA GCGGTTGAGC CGCCGAGGGA AGTGATAAAG TCTGAACTTT TTGCTCATCA GAAGGAAGGA TTGGGCTGGT TACTCCACAG AGAGAAATCT GGAGAGTTGC CTCCGTTTTG GGAGGAGAAA GATGGAGAAT TCTTGAATAC TTTGACGAAT TACCGCTCGG ATAAGCGGCC TGAACCTTTG CGTGGAGGGG TGTTTGCTGA TGATATGGGG TTGGGTAAGA CCCTTACTTT GCTTTCCTTG ATAGCTTTTG ATAGATATGG CAATGCATCG ACGAGTACGC CAACCGAAGA ACCTTTGGAT GTTGAAGGAG ACAAGATTGA AAAGAAGGGT AAAAAGAGAG GAAGAGGCAA GAGCAGTGAA AGTATAACTC GAAAGAAGCT TAAACCTGAT GATGTTGTTG GCATGAATGC GTCTCAAAAG ACAACGTTGA TCGTTTGTCC GCCTTCTGTG ATTTCAGCAT GGATTACGCA GTTAGAGGAG CATACTGTAC AGGGAAGCTT GAAGGTGTAT ATGTATCATG GTGGCGAAAG GACAGACGAT GTTAATGAGC TTATGAAATA TGATATAGTG CTGACTACTT ACAGCACTTT AGCTGTTGAG GAATCGTGGG AAGATTCTCC TGTCAAGAAG ATGGAGTGGC TGAGAATAAT TCTTGATGAG GCACACACCA TTAAGAATGC AAACGCTCAA CAGAGCCGAG TAGTTAGTAA GTTAAAGGCT TCTCGCAGAT GGGCTGTCAC AGGAACTCCT ATTCAGAATG GTTCATTTGA TTTGTACTCT TTGATGGCGT TTCTCCGGTT TGAGCCATTT TCGATTAAGA GTTATTGGCA AAGCTTGATA CAACGCCCGC TTGGTCAAGG GAATAAAAAG GGTCTTTCAC GTCTGCAGGT TTTAATGGCG ACAATTTCAT TAAGGAGAAC AAAAGAAAAG AGTTTGATTG GTTTACCGCC TAAGACTGTT GAAACTTGTT ATGTTGAGCT TTCTCCAGAA GAACGTCAGT TATATGATCA CATGGAAGGA GAAGCGAAAG GTGTTGTGCA GAATCTTATA AATAATGGAA GCTTGATGCG TAACTACTCA ACAGTTTTAA GTATAATCTT ACGGCTTAGA CAACTTTGCG ACGACATTTC TCTATGCCCT CCAGAATTAA GATCTTTTAC CACTTCTACA TCTGTCGAAG ATGTAACAGA TAAGCCAGAG CTTCTGCAAA AGCTGATTGC AGTATTGCAA GATGGTGAAG ATTTTGACTG TCCAATTTGC ATATCACCAC CAACAAACAT CATCATCACT CGATGTGCTC ACATCTTTTG CAGGGCTTGT ATCCTTCAAA CCCTTCAAAG AAGTAAACCA TTGTGCCCTC TTTGCCGTGG CTCCCTTACC CAGTCGGATC TCTACAATGC TCCGCCGCCT CCTCCGGATG ATTCCAACAC CGACGGAGAA GACACCAAAT CTTCAACCAA ATCCTCAAAG GTCTCAGCTT TACTATCACT GCTCATCGCA TCGAGACAAG AAAGCCCCAA CACAAAGTCT GTTGTGTTCT CTCAATTCAG GAAGATGCTG CTTCTACTAG AAACTCCACT AAAAGCTGCG GGTTTCACCA TCTTACGCTT GGATGGAGCA ATGACTCTGA AGAAACGCAC CCAAGTCATT GGAGAATTTG GGAATCCGGA GTTAACCGGA CCTGTGGTGT TGCTAGCGAG CCTCAAGGCC TCTGGTGCTG GAATAAACCT AACTGCAGCC TCAAGGGTTT ACTTGTTGGA CCCGTGGTGG AACCCTGCAG TTGAAGAACA GGCCATGGAC AGGATTCATA GGATTGGGCA GAAACAAGAG GTTAAAATGA TAAGGATGAT TGCGAGAAAC AGTATCGAAG AGAGAGTCCT TGAACTTCAG CAGAAGAAGA AGAATCTAGC TAACGAAGCT TTTAAAAGAA GGCAAAAGAA AGATGAAAGA GAGGTTAACG TTGAAGACGT GATTGCTCTC ATGTCTCTCT GAAACTCTCA ATCAGTGCTT AGCTCCTTAA CCGGATTTTT TTGTTCCCTC TAAGATTACA ATAACCGGTT ATTTACTGCT TTTGGTACGT AACCTTAACC GATGTTTATG TTGCCTTTAT CAACTAGACT TCTGTCTCGG TTAGTTTAAT TTAATTATGG GTTAGCTTG 
Length2799
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1783548.. 1786467
Download Sequence
A.thaliana
AGI-codeAT5G05130.1
DescriptionDNA/RNA helicase protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.1803 Ahg346398 beta-amylase 7
12.4499 Ahg931532 transportin 1
13.4907 Ahg479641 RNA-binding (RRM/RBD/RNP motifs) family protein
13.9284 Ahg472327 ARID/BRIGHT DNA-binding domain-containing protein
15.0997 Ahg929889 pre-mRNA-processing protein 40C
18 Ahg495060 DHHC-type zinc finger family protein
21.8174 Ahg893964 dicer-like 4
24.8193 Ahg906549 glutamate receptor 2
25.632 Ahg951726 tRNAHis guanylyltransferase
25.6905 Ahg477997 plastid developmental protein DAG, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression