Detail



ID : Ahg487440

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487440|fgenesh2_kg.6__574__AT5G06300.1
Sequence
AGAGAGAGAG AGAGAGAGAC AAAGTAACAA AGAGAAAAGA GAGAGAGAGA TATGGAAGAG ACAAAATCGA GATTCAAGAG GATCTGTGTC TTCTGTGGAA GCAGTTCTGG CAAAAAACCT TCATACCAAG AAGCTGCCAT TCAATTGGGT AACGAGTTGG TGGAGAGAAG GATTGATTTG GTATACGGAG GTGGTAGCGT GGGGCTTATG GGTCTCGTCT CTCAAGCTGT TCATCATGGT GGTCGTCATG TTCTAGGGGT CATTCCAAAA ACCTTGATGC CAAGAGAGAT AACCGGTGAG ACCATCGGAG AAGTGAAAGC CGTCGCCGAT ATGCATCAAA GAAAAGCCGA AATGGCTCGT CAAGCTGACG CTTTCATTGC CCTTCCTGGT GGGTATGGTA CGTTGGAAGA ATTGCTGGAA GTCATTACAT GGGCTCAACT CGGTATCCAC CGTAAGCCGG TGGGTCTTCT TAACGTGGAT GGTTACTACA ATTCGCTGTT AACGTTTATT GATAAGGCTG TGGACGAAGG ATTTATATCC CCAATGGCTC GTAGAATCAT CGTCTCAGCT CCAAACGCTA AAGAGTTGGT TCGACAACTC GAGGAATATG AACCGGAGTT CGATGAGATA ACATCGAAAT TGGTTTGGGA TGAAGTGGAC CGGCTCAGCT ATGTACCGGG TTCGGAGGTA GCTACCGCTA CGTAAGGATA TAATATGGGG AGTTTATTTT TGGGTAAAAG CAGTGTACAG CGGAATTAAA GTTTTTTAAC ATCAGAAGGA AAGGTCGGAA AGAAGACGAA AGAAAGTATT GGGGTCGTTT TGATAACATT ATTTTGTAGG GGTGGTTAAA TGTGTGAAGT GGATAAACCA CGTGGGTAAC TGCTAACCGC GTATATACCA AACCCCATCA TCCCCACTTG TCTTTGTACA TTTTGGTTTA ATGGAAAAAA TGAAGGATAG GGCCTATTAT CAACAAATGA CAAAACGATC CTTTTCTTTT 
Length1000
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2273166.. 2276743
Download Sequence
A.thaliana
AGI-codeAT5G06300.1
DescriptionPutative lysine decarboxylase family protein
TAIR curator summary
Alias[LOG7][LONELY GUY 7]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg474819 galactinol synthase 2
7.74597 Ahg493534 Protein of unknown function (DUF803)
11 Ahg486886 serine/threonine protein kinase 1
13.2665 Ahg476598 glutathione S-transferase TAU 10
17.4929 Ahg485654 purple acid phosphatase 22
18.3303 Ahg493869 PLC-like phosphodiesterases superfamily protein
22.1811 Ahg471996 Protein of unknown function (DUF789)
24.1247 Ahg920694 Pyridoxal phosphate phosphatase-related protein
24.1868 Ahg919447 non-specific phospholipase C1
24.8193 Ahg893182 nuclear factor Y, subunit A1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression