| Annotation |
|---|
| Description | jgi|Araly1|487534|fgenesh2_kg.6__668__AT5G07120.1 |
| Sequence |
GCCACTCCGG TTATTTATTG CAGTTCACGA TGACCGTATC CTCGTAATCT CCAATATCTC GAATCGAATC GAAAAACCCC AAACTTCCTG TGAATTTATT ACTAAAATTA GCTCACTTCA TAGATTTATC GGAGATGATG GGTTCAGAGA ATGACGACGA GTCCCATCTC CACTCGTCCA AAGAAGAGAT GGAGAATCTC TTTCTCCGCG AAGATGGCGA TCCCTTGACC AGAAGCCATG TCAACGGCGA TAAATCTAAC TCTAATTATC GCAGCGCTGT GTCAACTCTC TCCGACTCTC GTCATCCGTC GATTGTAGTA ACTCCGGCTG ACTCCGATCC ACTTTTTGCG CCGCCGTCTT ACTACAGAGA ATCTCGGAGC CCTCGTTCTA AACCAAACGG CGGCGACAGA GGTAGCTCTT ACCTCGAGCC TCCGTCTTAC GCGGATGTTA TCTTCAGTCC TTTCGATGAT ATTTCTGAGA TCAACGGCTC AGAAGATGGC GGAAGCCGTC ATAGTCAGTC CTCAGATTCA TTATCTAGAT CTCCGTCTTC TTTGAGCTCC GATTACATCA AGATCACTGT TTCTAACCCT CAGAAAGAGC AAGAGGCCAC AAATTCAATG ATTCCTGGAG GAAGCACTTA CATCACTTAC CAGATTACAA CTAGAACGAA TCTCCCTGAC TACGGCGGCT CGGAGTTTAG CGTTCGAAGA AGATTCAGAG ACATTGTTAC ATTGGCTGAT AGATTAGCTG AGTCGTATAG AGGGTTTTGC ATCCCACCGA GGCCAGATAA GAGTGTTGTT GAGAGCCAAG TGATGCAAAA GCAAGAGTTT GTGGAGCAGA GAAGAGTTTC ATTGGAGAAG TATTTGCGCA GGCTTGTTGC ACATCCTGTG ATTAGGAACA GTGATGAATT GAAGGTTTTT CTTCAGGCGC AAGGGAAGTT ACCGCTGGCT ACGAGCACTG ATGTGGCTTC TAGGATGTTG GATGGTGCCG TGAAGCTGCC GAAGCAGCTG TTTGGTGAAG GCGGAGGAGC TTCTTCGGTT GAGGTGGTTC AGCCGGCTAG AGGAGGTAGA GATTTTCTGA GATTGTTCAA AGAACTTAGA CAGTCGGTCT CTAATGACTG GGGTGGATCA AAACCACCTG TTGTGGAAGA AGATAAAGAG TTTTTGGAGA AGAAGGAGAA GATGTATGAT CTTGAGCAAC AGATCATTAA TGCTTCACAG CAGGCTGAAT CCCTCGTGAA GGCACAGCAA GACATGGGGG AGACTATGGG GGAAATGGGA TTAGCATTCA TTAAGCTGAC GAAATTCGAG AACGAGGAAG CTGTCTTCAA TTCTCAAAGA GCTCGTGCCA ATGATATGAA GAATTTTGCC ACTTCAGCAG TAAAAGCAAG CAGATTTTAC AGAGAGCTGA ATTCCCAGAC GGTCAAGCAT TTGGACACAC TCCACGACTA CCTTGGCCTA ATGATGGCAG TCCAGGGCGC CTTTGCAGAT AGATCTAGTG CGTTACTGAC AGTGCAGACG CTTCTATCTG AGCTTTCTTC ACTTGGAGCA AGAGCAGAGA AGCTAGAAGC TGCATCATCA AAGGTCTTTG GCGGTGACAA ATCAAGGATT AAGAAGATAG AAGAGTTAAA AGAAACCATC AAGGTCACTG AGGACTCCAA AAATGTTGCG ATCAGGGAGT ACGAGCAGAT CAAGGAAAAT AACTGGTGTG AGGTTGAAAG GCTGGACAGG GAAAGGCGTG CAGACTTCTT GAATATGATG AAAGGGTTTG TTGTTAATCA GGTTGGATAT GCAGAGAAGA TCGCCAATGT GTGGACAAAG GTTGCTGAGG AGACAAGTCA ATACGGTAGA GAGAGCTCTT AACA |
| Length | 1864 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2607891.. 2610355 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G07120.1 |
| Description | sorting nexin 2B |
| TAIR curator summary | Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole. |
| Alias | [SNX2b][sorting nexin 2B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg940406 | conserved peptide upstream open reading frame 41 |
| 6.245 |
Ahg331828 | |
| 10.8628 |
Ahg919087 | multidrug resistance-associated protein 5 |
| 11.9164 |
Ahg484193 | ammonium transporter 1;1 |
| 13.7477 |
Ahg932741 | |
| 15.4919 |
Ahg338250 | LRR and NB-ARC domains-containing disease resistance protein |
| 18.7083 |
Ahg478442 | PLAC8 family protein |
| 24.6577 |
Ahg934591 | SCAR homolog 2 |
| 25.0998 |
Ahg936467 | plant UBX domain-containing protein 1 |
| 28 |
Ahg355779 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|